Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0075 ATGGATGCAACCCAGAGGGAGAAAATCTATGTTGCTGTTGGTAATGATGTGCAGGATGGTTTCAAGACTTTGAATTGGGTTTTCAATAAATGGAATTCTCATTCAATTTATGTTGTTATTCTCCATGTGAATCACAGCAATTCCAAGGAGTATGTTTCTACACCATTTGGGAAACTTCCAGCAAGTTCTGTGAATGATAAGAAGCTGGAAGTTCTCAGGAACTATGAGCAAGAGAAAATCACCAAGCAGTTCTCCAAGTATATTGCTCACTGTGGCAAGGTCAAGGTGCCAGCAGAAATTCTTGAAGCTGAGAAATGTGATGAACCTATCCAAAAGCGAATCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGGTCATGGCATTTTCATTCATGAAACCCTCCTGGAAATCAAAAGCTGCCATTAGTGGATTGTTCTATGTTAATCAGCACAAGCCTTCCTTCTGTGAATTGTTCATAGTTTGTGGGGGGAAACAAGTGTTCCTCAGAGGGAAGAATGATGAGAAAATCATGGAGGATGATAATGGGGTCATAGTTGCAAGGATGAGGGATAAGGTAAGTTTCAAAGATTGGCTAGAAAAAATGTTCAATGATAAATCTAATGAATCCCAAGGCAGAAGTGGATCAACTTCCTCAGCAAAATTGGAGTCGGCGGTCACACAAGGCCAGTGGGAATTTTATCTCCAAGAAATTGAAAATTATTATCAAGAATTGATGTCGTCTTCAAATTCAGAGGGACGGAGCTGTGGACAAGACAATGACGGCTCGCAGATTAGTCCAATTGAGCCACATGTCACTGAACGTAACAATTCCAATACGAGTGCTGCAGAAAAAATTGAGATCCTACAAAATAAACTGAATGAAGCTCACAAGTCCATCCAACTGAAGAGGAAAGAAGCCAAGGACAATGCACAGAGACATGCAAGAGCACAATGGGCAATTTGCTTATGCAACTGCAGGGCTGAAGAAGTGGAGGGACGAATAAAGGAAGAGGTGAGCACAAGGGAAGAGCTAAAGAAGGAACTGGATTCAGAGAAGGAGCAAACGCAGGAGCTGAGAATCGACGTGGAAGAGAGCAAGAGGAGGCTTAGCTCACTGTCAGAGCTCCAATCCGAGCTCTCCAACAGGCTCCACGTGTCCGCACGGGCCAAGTCACGTGCAGAGGCGCAACTAGACAGTGCGGTTCTTGAGAGAGCGCGGATGGTGAGGGAGATAGAGGAGCTGAGGAGACAGAGAGACGTGCTCAACAGAAGGATCGAGTTCTGCAAGCAAAAGGATGCGATTGGAATGGCCGCGAGGCTGAGCGACACGTGTTGCGGTTTCAGGGAGTTCTCCGAGGAGGAGCTGCGGTTGGCCACCGACAACTTCTCGGAGAGGTTGAGGTTCAAGTCTGGTGGGGGCGGTTGGACCAATGTGTACAGAGGACGAATGAGCCATTCCACCGTTGCTATCAAGATGCTCACTTCTTTTCATTCTCTGTCACATCAAGATTTCCAAGCTAAGGTGAAACTTCTTGGTGACATTAGGCAACCTCATCTGGTTGCAATGGTGGGCTTTTGCTCCGAGCCTAAATGCATACTTTTGGAGTACATGCACAACGGAAGCTTACGAGACATGCTCTTTTCAAGGAGAAGAAACCGGGCTTTAAGGTGGCATGACCGAATACGAATAGCTGCCGAAGTTTGCTCGGGCCTGAGCTTTCTCAATTCAGTAAAGCCCAGGCCCGCTTTTCACTGCCATTTGACCCCAGCTAATGTCCTCCTAGACCGCAATCTGGTTGCAAAGATCACGGGCTTTGGGCTTAATGAGTGCCATGACAAGGAATGCAACGCTGAGTCAGATATTGGGGCCTTAGGGGTTTTGCTGATGCAAGTTCTGACTGGTAGGAATTGGGCCGGGCTTGCTGAGGAGGCCATGACATTGGACATGGACAGAGAGGCCTTGGTTGGGGTTCTTGATGAGATGGCAGGACCGTGGCCGTTGGATCTAGCGGTAGAAATTGCAGGCCTGGCGATGAGGTGCATGCCCATGAAAGATAGGCCCAATCCTGAGTTGAGCATTGCAAGGGCCATGGAGGAACTCAAGGAGATAAGAAGGAAAGGTGATGAAATCGTAGCAAGGGAAGGGCGGAGGGTAATCACTGGTGGAGCTATAGGAAGGGATGATGGCTCCAGCGATGTGCCTAGTGTTTTCCTTTGCCCTATACTTCAGGAGGTAATGAAAAGTCCACACGTGGCAGCAGATGGATTTTCTTACGAGCAGGAAGCAATAGAACAATGGCTGCAATCGGGCCATGACACATCACCAGCGACAAACCTGAGGCTGAAGCACACATTCCTCACCCCGAATCACAGCCTTCGCTCCCTCATTGAGGACTGGCGAAGTAGTAGTAGTAGTAGGAACACATCACCTAAAGTTGCAAATTAA 2451 0.4721 MDATQREKIYVAVGNDVQDGFKTLNWVFNKWNSHSIYVVILHVNHSNSKEYVSTPFGKLPASSVNDKKLEVLRNYEQEKITKQFSKYIAHCGKVKVPAEILEAEKCDEPIQKRIIDLIFGLGITKLVMAFSFMKPSWKSKAAISGLFYVNQHKPSFCELFIVCGGKQVFLRGKNDEKIMEDDNGVIVARMRDKVSFKDWLEKMFNDKSNESQGRSGSTSSAKLESAVTQGQWEFYLQEIENYYQELMSSSNSEGRSCGQDNDGSQISPIEPHVTERNNSNTSAAEKIEILQNKLNEAHKSIQLKRKEAKDNAQRHARAQWAICLCNCRAEEVEGRIKEEVSTREELKKELDSEKEQTQELRIDVEESKRRLSSLSELQSELSNRLHVSARAKSRAEAQLDSAVLERARMVREIEELRRQRDVLNRRIEFCKQKDAIGMAARLSDTCCGFREFSEEELRLATDNFSERLRFKSGGGGWTNVYRGRMSHSTVAIKMLTSFHSLSHQDFQAKVKLLGDIRQPHLVAMVGFCSEPKCILLEYMHNGSLRDMLFSRRRNRALRWHDRIRIAAEVCSGLSFLNSVKPRPAFHCHLTPANVLLDRNLVAKITGFGLNECHDKECNAESDIGALGVLLMQVLTGRNWAGLAEEAMTLDMDREALVGVLDEMAGPWPLDLAVEIAGLAMRCMPMKDRPNPELSIARAMEELKEIRRKGDEIVAREGRRVITGGAIGRDDGSSDVPSVFLCPILQEVMKSPHVAADGFSYEQEAIEQWLQSGHDTSPATNLRLKHTFLTPNHSLRSLIEDWRSSSSSRNTSPKVAN* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0075 816 Coils Coil 280 311 - -
Dod02g0075 816 SUPERFAMILY Protein kinase-like (PK-like) 448 689 IPR011009 -
Dod02g0075 816 ProSiteProfiles U-box domain profile. 734 808 IPR003613 GO:0004842|GO:0016567
Dod02g0075 816 SMART Ubox_2 738 801 IPR003613 GO:0004842|GO:0016567
Dod02g0075 816 Coils Coil 392 433 - -
Dod02g0075 816 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 803 - -
Dod02g0075 816 Pfam U-box domain 735 804 IPR003613 GO:0004842|GO:0016567
Dod02g0075 816 CDD RING-Ubox_WDSUB1_like 739 780 - -
Dod02g0075 816 Coils Coil 695 715 - -
Dod02g0075 816 Pfam Protein tyrosine and serine/threonine kinase 473 616 IPR001245 GO:0004672|GO:0006468
Dod02g0075 816 Gene3D Transferase(Phosphotransferase) domain 1 540 719 - -
Dod02g0075 816 MobiDBLite consensus disorder prediction 250 282 - -
Dod02g0075 816 Gene3D Phosphorylase Kinase; domain 1 438 539 - -
Dod02g0075 816 ProSiteProfiles Protein kinase domain profile. 466 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0075 816 Coils Coil 329 384 - -
Dod02g0075 816 SUPERFAMILY RING/U-box 730 804 - -
Dod02g0075 816 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 733 810 IPR013083 -
Dod02g0075 816 PANTHER OS02G0152300 PROTEIN 5 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0075 Dod-Chr2 1236465 1242521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0075 3 811 U-box Gene Family AT5G65500 48.900 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod02g0075 PK_Tyr_Ser-Thr 9.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0075 - - gmx:100786771 1191.79