Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0068 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCCATGGATTGGGACTTTGCAGGAACCTGGGCTGCGATAAACATCCGCGGGTTGTGACAAGAAGCAAGTTACATGTTGTGGATGCAGATCCTTCATATCCTCTTTCGTTCGTGAAACAGGATTGTTGGGGTTTTCAGCACTTTCGTCACATAAACAGGCCAATACATACATTGCCTTACAAATCCCGCTCTTTCAAGTGCCATTCTCTTCTAGTACCAGGCCAGCCAAGTGAGCTACCAGTTGTTAAGGTGGCTGCTACTTTGCTAGCAAGGTATTGTAATATGTTACAAAGTAGTCCTGTAATAGTAAAGTTGATTCCTGCAGTTGGCATTATCATTTTTGCAGCATGGGGTCTTGGCCCATTAGCATGTCAGACAAGGAAACTGCTTTTTCAGAGGAGTGATAATAGTTGGAAGAAAAGTACCACACATTATATCGTAACTTCTTACCTTCGGCCTTTGCTGTTATGGACTGGAGCAATACTTTTTTGCAGGGCATTGGAGCCAGTAGTTCTACCTACAGAAACTGGCCAGGTTGTTAAGGAACGGCTTTTGAATTTTGTAAGATCATTGTCGACTGTCCTGGCCTTTGCCTATTGTTTATCAAGTGTGATTCAACAAGCACAGAAATTCTTAGCTGAGAGCACTGATGCAAGCGAGGCAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCAGCAGTATGGATTGCAGCCTTTTCACTGTTCATGGAATTGCTTGGCTTCTCTACCCAGAGATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGCAATGATTCATGCAACTCGTCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTTGGCTGGTGGTCACCTACAATTGTAAGAGGTGAAGATGGTGAAGCTGTACACATTCCAAATCACAAATTTACAGTGAATGTTGTGAGAAACCTCACTCAAAAAACACATTGGCGAATCAAAACTCACCTTGCCATTAGTCATTTGGATGTTAAAAAGATTAATAATATTGTTGCTGACATGCGGAAAGTATTAGCAAAAAATCCTCAAGTTGAGCAGCAGAGATTGCACAGGAGGGTCTTTTTGGAGAATATAAATCCTGAAAATCAGGCTCTTTTGGTTAGTATGAAGTGCTTATAG 1260 0.4198 MALPGSLQLSHGLGLCRNLGCDKHPRVVTRSKLHVVDADPSYPLSFVKQDCWGFQHFRHINRPIHTLPYKSRSFKCHSLLVPGQPSELPVVKVAATLLARYCNMLQSSPVIVKLIPAVGIIIFAAWGLGPLACQTRKLLFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILFCRALEPVVLPTETGQVVKERLLNFVRSLSTVLAFAYCLSSVIQQAQKFLAESTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDGEAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVKKINNIVADMRKVLAKNPQVEQQRLHRRVFLENINPENQALLVSMKCL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0068 419 Pfam Mechanosensitive ion channel 240 400 IPR006685 GO:0016020|GO:0055085
Dod02g0068 419 Gene3D - 193 297 - -
Dod02g0068 419 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 418 - -
Dod02g0068 419 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 418 IPR045042 -
Dod02g0068 419 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Dod02g0068 419 Gene3D - 298 351 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0068 Dod-Chr2 1183255 1186246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0068 9 419 Mechanosensitive Ion Channel Family AT5G10490 65.783 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0068 K22047 - gmx:100789444 730.709