Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0059 ATGGGATGGCATGGCACGCAGCACGTTAGGAATTACTATTACACTGGAGCTCAAATGATAAGAAGGAGCTCTTCTCAGACATTCAGACCATATGATTACATCTTCACAAAGCCAAGATCAAAGGAAGAGAACAAAAAACAGGCTGCTATAAATCACAGTCAAGCAGAAAGGAGGCGCAGGATGCGAATCAATAGTCAATATGAGACCCTCAAAAAGCTCTTTCGAAATAATGAAAAGAGGGACAAGGCATCATTGCTGGCGGCCACTATCGAGATAGTTAATAAATTGAAAAAAGCTAGCAGCCCAAAGGAAGAAGCTAGTTGCTCAAAGAAGGAAATGAAAGAAGCTACCATCACAAATGAAGAAGCTAGTAGCTCAAAGAATGAAATGAAACAAGCTAGTAACCCGACACGTGTTGTTTTTCCTAGTTGGGAAAACAAGTGGAATCTAAGACATGAGGAGGGTCTAATGAAGGCCACATTGAATTGTGATGATAAGCCAGGATTGATGTCAACAATAGCAAAGGCCCTGGGGTCAGTGGAAGCCAGGGTGGTGAAGGCTGAGATGGTGACTGTAGGAGGAAGGACCAGGATTGTGCTGTGGGTGAAAGATTCAAAGGATGGAAATAAGGGTGAGGAGACCCTAAAGAGGACACTCAGCACTCTCATTCAGAGGTCAGCCCCTAAGAAGAGGCGTTATAGTCAATAA 708 0.435 MGWHGTQHVRNYYYTGAQMIRRSSSQTFRPYDYIFTKPRSKEENKKQAAINHSQAERRRRMRINSQYETLKKLFRNNEKRDKASLLAATIEIVNKLKKASSPKEEASCSKKEMKEATITNEEASSSKNEMKQASNPTRVVFPSWENKWNLRHEEGLMKATLNCDDKPGLMSTIAKALGSVEARVVKAEMVTVGGRTRIVLWVKDSKDGNKGEETLKRTLSTLIQRSAPKKRRYSQ* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0059 235 PANTHER TRANSCRIPTION FACTOR BHLH30 8 229 IPR045847 GO:0003700|GO:0006355
Dod02g0059 235 SMART finulus 53 102 IPR011598 GO:0046983
Dod02g0059 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Dod02g0059 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 99 IPR036638 GO:0046983
Dod02g0059 235 CDD ACT_UUR-ACR-like 160 224 - -
Dod02g0059 235 MobiDBLite consensus disorder prediction 119 135 - -
Dod02g0059 235 MobiDBLite consensus disorder prediction 38 58 - -
Dod02g0059 235 Pfam Helix-loop-helix DNA-binding domain 51 96 IPR011598 GO:0046983
Dod02g0059 235 ProSiteProfiles ACT domain profile. 158 234 IPR002912 -
Dod02g0059 235 SUPERFAMILY ACT-like 160 225 IPR045865 -
Dod02g0059 235 MobiDBLite consensus disorder prediction 100 135 - -
Dod02g0059 235 Gene3D - 158 227 - -
Dod02g0059 235 PANTHER TRANSCRIPTION FACTOR BHLH131 8 229 - -
Dod02g0059 235 Gene3D - 41 108 IPR036638 GO:0046983
Dod02g0059 235 MobiDBLite consensus disorder prediction 100 118 - -
Dod02g0059 235 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0059 Dod-Chr2 1094145 1095286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0059 51 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 32.787 2.32e-19 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0059 HLH 7.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0059 - - adu:107487037 296.589