Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0054 ATGGCTGAGAGCTCAAACCTTCTATGTTTTGAGAACAACAGCACCTGCTTTGATGATGATGATGATGATTTGGAGTGTAATGGTGTTGCTGCTGATGGGTCTGGAATCTCACCTTCCTGGGACCACAGGAACCTTAACTCCGACCATCCATGTCCGAGCCGGGACATCCTTGGATCGGGTCCCATGTCATGTTTCTTGGTTCAGAGTGAAGAGACAGTGAGGTTCATGGTTGAGAGGGAGAGGGAGCATTTGCCAAGAGAGGATTACCTCAAGAGGCTGCGTAGTGGGGACTTGGACTTGACTGGGAGGAGAGAGGCCATTGATTGGATTTGGAAGGTTCATGCTTATTATGGTTTTGGACCCTTGAGCTTTTGTTTGTCTGTGAACTACTTGGATCGCTTCCTATCAGTTTATGAATTGCCAAAAGGTAAAAGCTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTGTCAATTGCAGCCAAAATGGAGGAGGTTAAAGTGCCTCAATCTGTCGACTTACAGGTTGGAGAGCCTAAATTTGTATTTGAAGCTAAGACCATTCAAAGAATGGAACTGCTTGTATTAAGCACATTGAGATGGAAAATGCAAGCCTTAACTCCTTGTTCCTTCATAGACTATTTCCTAAGGAAGATCGCTTCCGAGCAGCATCCCGCAAAGCCATCCATTTCGAGATCAATACAGCTCATCCTTAGCATAATCAGAGGTGTCGACTTCTTGGAATTCAGGCCTTCTGAAATTGCTGCGGCAGTTTCCATTTCAAGGGAATTGCAAGCAAAGGATATCGATAAGGCCTTAGCCGGCCTCTTCATTATAGAGAAGGAGAGGGTTCTAAAATGTGTTGAACTGATAAGAGATTTGTCCTTGATCAATGTTTCTGCTAATTTGGTTGGCAAGTCTGCACCACTCGTGCCCCAAAGCCCTGTTGGGGTGCTTGATGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACGGTTGGTTCATGCCCAAATTCTTCACATAATAGTCCAAACACTAAAAGGAGCAAATCAGATGAACCTTCAAATGGGACCTAA 1074 0.4469 MAESSNLLCFENNSTCFDDDDDDLECNGVAADGSGISPSWDHRNLNSDHPCPSRDILGSGPMSCFLVQSEETVRFMVEREREHLPREDYLKRLRSGDLDLTGRREAIDWIWKVHAYYGFGPLSFCLSVNYLDRFLSVYELPKGKSWTVQLLAVACLSIAAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLRKIASEQHPAKPSISRSIQLILSIIRGVDFLEFRPSEIAAAVSISRELQAKDIDKALAGLFIIEKERVLKCVELIRDLSLINVSANLVGKSAPLVPQSPVGVLDGGCLSYKSDELTVGSCPNSSHNSPNTKRSKSDEPSNGT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0054 357 MobiDBLite consensus disorder prediction 332 357 - -
Dod02g0054 357 ProSitePatterns Cyclins signature. 103 134 IPR006671 -
Dod02g0054 357 SMART Cyclin_C_2 205 312 IPR004367 -
Dod02g0054 357 Pfam Cyclin, C-terminal domain 206 295 IPR004367 -
Dod02g0054 357 CDD CYCLIN 102 195 IPR013763 -
Dod02g0054 357 PANTHER CYCLINS 55 351 IPR039361 -
Dod02g0054 357 PANTHER CYCLIN-D4-1-LIKE 55 351 - -
Dod02g0054 357 Gene3D - 76 289 - -
Dod02g0054 357 Pfam Cyclin, N-terminal domain 73 202 IPR006671 -
Dod02g0054 357 Gene3D - 86 203 - -
Dod02g0054 357 SUPERFAMILY Cyclin-like 64 202 IPR036915 -
Dod02g0054 357 SMART cyclin_7 108 196 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0054 Dod-Chr2 1032167 1035176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0054 68 271 Core Cell Cycle Gene Families AT5G65420 62.019 1.34e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0054 K18810 - gmx:100794010 472.241