Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0050 ATGGAATTCGAGGACCAAGAGGAGCAAGAGGAGGAGCTGTCTATGGGAGGAGGAGGGGCGGGTTATGACCCGCTCGGAAACCCGACCCGAGTCAAAATGCCTGGCGGCGCTGAATCCATGATGGTGGCTCAGCCCTTGAGAAACAACAACAGTAACAGTAACAGTAACAGCAACAACAACAGCATAGTGAAGGCACGGTACAGGGAGTGTCTGAAGAACCACGCCGTCGGGATCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGGCGGCCGGAACAGAGGGTACACTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAGGAGACCACCGAAACCGCTGCAGCCGGTGACCCTTACCTGCTGACTCACCACCCTTACCCTCATCACCACCACCACCACCACCAACCTCCGCCGTTTCCGACGTACTACCGGACTCCGGCGGGGTACTTGCACTGTGGGGGGACAGCACAGGGGGACGCTAGCGCTGCCGTCAACATCCGGCGCCGGAGGAGGAAAGGATATTGA 549 0.6066 MEFEDQEEQEEELSMGGGGAGYDPLGNPTRVKMPGGAESMMVAQPLRNNNSNSNSNSNNNSIVKARYRECLKNHAVGIGGHALDGCGEFMAAGTEGTLDALKCAACNCHRNFHRKETTETAAAGDPYLLTHHPYPHHHHHHHQPPPFPTYYRTPAGYLHCGGTAQGDASAAVNIRRRRRKGY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0050 182 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Dod02g0050 182 Pfam ZF-HD protein dimerisation region 65 117 IPR006456 -
Dod02g0050 182 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 43 148 - -
Dod02g0050 182 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g0050 182 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 43 148 - -
Dod02g0050 182 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 66 116 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0050 Dod-Chr2 999183 999731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0050 63 167 ZF-HD Transcription Factor Family AT2G02540 45.455 1.58e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod02g0050 ZF-HD_dimer 1.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0050 - - aip:107639896 207.994