Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0042 ATGGAGGAATCACTGAGGCGCCTCAACGGCATGGCCCTGCCGGGCCCCGAACCCGACCACCCGCAGGACCCCAAGAAGTGCACCGCCGCCAACAAGCGGGCGCTCCGAGAGAACGGCGCCCCCGGCGGCGGCGGAGCCATGAGGTACCGCGGCGTGAGGCGGAGGCCGTGGGGCCGTTACGCCGCCGAGATTAGGGACCCTCAGTCGAAGGAGAGGCGGTGGCTGGGGACCTTCGACACGGCGGAGGAAGCCGCCTGCGCCTACGACTACGCCGCCAGGGCCATGCGTGGGCTCAAGGCGAGAACCAACTTTGTGTACCCAGCTTCTCCTCCTCACCCTTCTTCCGCCACCGACCACCACCACCACCACAGCCACCTCTTCAACTTCCCTAACCACTTTAACTTCCCCAAGCAACAAACCCATAACCAACTGATCTTCAATGGTAATAACTGTCAGTTAGTTGGCGGAGAGGGTGGTTGGCACTCCTGCTCTGACCCTCACGCCGTTAATAACTTTGATCTCTCTCCTACAACCCTCCACCAGCAGCGAAACAATTCTCCCCTGAACACGTTTCTCCTTCGTGACTTTCTCACCTCTTCCTCCTCCTCCAACCGTTCCTCGCTGGTCTCTGACCCCTTGTCCTTCAACAAGGGCAGCTTGGTGAATGCACATGGCGGCAACGACGTTAGTGGGAGTAGCATGCCCTCTTCCCTCGCGATGAACACAACTAATTATCTCAGTTGCGGTGGCGGTGGAACCAAGAACGCCGAAGGTGATGGTGAAGATACGGGAGAGTTCTTTGAACGTTCGGACTCTGGGTTGTTGGAAGAGATAGTCAGCAGGTTCCTGACGAACTCGAAGCCGAACAAGCTGTGTGATGAGGCCGAGGGTATGGCCAATACAGAGGAGGCTCCTTCTTCTTTCAACCACCATGCTGCGGAGTCGGTTCCTTCGCACGTGCTCGTTCCCAAGGACGAGGGTGGTTTTGGCGTCCCTTTTGATCATCACCAGCAGGGTTTCACCACCGTGCAGCTGCAGCAGCAGGTTCAGCCTGATGCTTTCAATGGGTTTAGCGCCGTGCAGGGTAGCATCAGCATGCCGCTGGGGAATGATGACCCAATCATGGTGAACCATGCAGATGGAGAATGCTCTCTCATGGAAGACATTTTTCAATACCCGGAGATTCTTAACAATGCTTTCGCTGTCAGGATGCAAAATGCTTAA 1224 0.5694 MEESLRRLNGMALPGPEPDHPQDPKKCTAANKRALRENGAPGGGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDYAARAMRGLKARTNFVYPASPPHPSSATDHHHHHSHLFNFPNHFNFPKQQTHNQLIFNGNNCQLVGGEGGWHSCSDPHAVNNFDLSPTTLHQQRNNSPLNTFLLRDFLTSSSSSNRSSLVSDPLSFNKGSLVNAHGGNDVSGSSMPSSLAMNTTNYLSCGGGGTKNAEGDGEDTGEFFERSDSGLLEEIVSRFLTNSKPNKLCDEAEGMANTEEAPSSFNHHAAESVPSHVLVPKDEGGFGVPFDHHQQGFTTVQLQQQVQPDAFNGFSAVQGSISMPLGNDDPIMVNHADGECSLMEDIFQYPEILNNAFAVRMQNA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0042 407 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Dod02g0042 407 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 407 - -
Dod02g0042 407 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 407 - -
Dod02g0042 407 MobiDBLite consensus disorder prediction 1 50 - -
Dod02g0042 407 MobiDBLite consensus disorder prediction 251 270 - -
Dod02g0042 407 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Dod02g0042 407 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0042 Dod-Chr2 763358 764581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0042 46 120 AP2-EREBP Transcription Factor Family AT1G24590 82.667 1.96e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g0042 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0042 - - gmx:102669715 228.024