Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0036 ATGTTCTCTTTCTGTTCCTGTTCCTGTTCCTCCTCCACCACCACCATGCCTCTTCTACTCTCTGCTACGCATCCTCCCTCAATCCCTTCACTCCCACCCAACAACAACAACGAGGCTCTCACCTCACACTTTCGCAAGCGCTTCTTCTCTTTTCCTCTCGACAACACAGCAACGCCAGCCCCTCTCTCTCTCCGTTCCGCGCGCATTCTCTCATCGTCCCCTAAATCCGCTTCCTCCATCAACGGACTCTCCGTTCACGACAAGCCAGAACCTTCCGGAACCGAGGCAGCTGCTGCTGCTCCTGCTCTTCCCGAGCTCCTTGACGCCCTCCGAAGATGGGTCCGGCTACTCCCTTCGATTCTTCCAGGTGGAACCTGGTGGGACTTCCATGACAACATCGAGCTCCAAGTATCGGCTCAGCCGGTTACCGTGTGGCGCGCACTCGCCAAAATGTGGCAGCTCGTTTCACGTGACCGATGGGTCATCTACGCCGCTTTCTCCGCTCTCATTCTCGCAGCGGTTTCGGAGATTTCGATACCGCATTTCTTGACGGCGTCCATCTTCTCGGCACAGGGTGCGGACATTGCGGTGTTTCATCGGAATGTGCGTCTGTTGGTTCTGTTGTGTGTAACTTCGGGAATTTGCAGTGGGATACGAGGTTGTTGTTTTGGCATCGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCGTCCCTTCTTGTTCAGGATATATCATTTTTTGACACTGAAACAGTTGGTGATTTGACAAGTAGGCTTGGTGCTGACTGTCAACAAGTGTCACGGGTTATTGGAAATGATCTTAACTTGATACTGCGCAATTTTCTCCAGGGAACAGGTTCATTAATCTACTTGTTAATTTTGTCTTGGCCACTTGGTTTATCTACGTTGATAATATGCTCCATAGTAGCAGCGGTGATGTTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATTCAAGAAGTCACGGCTTCTGCAAATGATGTAGCTCAAGAAACCTTCTCTCTTATACGAACTGTCCGTGTTTATGGAACAGAAGAAGAAGAACTTGGAAGGTACAAATGGTGGCTGGGGAAATTAGCTGACATAAGCTTGCGACAAAGTGCTGCTTATGGATTTTGGAATTTTAGCTTCAATACTCTTTATCATTCTACTCAGGTTATCGCTGCGCTGTTTGGAGGAATGTCTATTCTTGCGGGTCATATTACTGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAGTCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTCACCTGGCAACCAATTCATAGCAAGAGGGGTAAAGTTGCAGGGGTTAGTGGGCCATATTGAGTTTCTAAATGTATCTTTTCGCTATCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTTGTCCATCCCAGTGAGGTGGTTGCAATTGTCGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTGAACCTTTTACTCCGTCTCTATGAGCCTACAAGTGGTCAGATTTTGATAGATGGCATCCCTGTTAAAGATTTGGACATCATGTGGTGGAGAGAGAGAATTGGATATGTGGGACAGGAACCCAAGCTCTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACTCTAGATGTAAAACAGGAAGATGTTGAATGGGCTGCAAAGCAGGCCTATGCCCATGACTTCATCTCAGCGCTTCCCAATGGTTATGAAACAGTTGTTGATGATGATCTGTTAAGTGGGGGACAAAAGCAGCGGATTGCTATTGCCAGAGCCATCCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAGAGCGAACATAATGTCAAGGGTGTTCTTAGATCCATCAGAAGTGACTTTGGGACAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACGATACAAGCAGCTGATAGGATTGTGGTAATGGATGGTGGTCAAGTTGTGGAGATTGGAAGTCACAGGGAACTTCTCCTAAAAGATGGCTTATATGCACGGTTGACTAGAAAACAGGCTGATGCCATGGCATGA 2172 0.4627 MFSFCSCSCSSSTTTMPLLLSATHPPSIPSLPPNNNNEALTSHFRKRFFSFPLDNTATPAPLSLRSARILSSSPKSASSINGLSVHDKPEPSGTEAAAAAPALPELLDALRRWVRLLPSILPGGTWWDFHDNIELQVSAQPVTVWRALAKMWQLVSRDRWVIYAAFSALILAAVSEISIPHFLTASIFSAQGADIAVFHRNVRLLVLLCVTSGICSGIRGCCFGIANMILVKRMRETLYSSLLVQDISFFDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNFLQGTGSLIYLLILSWPLGLSTLIICSIVAAVMLHYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGFWNFSFNTLYHSTQVIAALFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLSPGNQFIARGVKLQGLVGHIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILIDGIPVKDLDIMWWRERIGYVGQEPKLFRMDISSNIRYGCTLDVKQEDVEWAAKQAYAHDFISALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSIRSDFGTRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0036 723 Pfam ABC transporter 497 644 IPR003439 GO:0005524
Dod02g0036 723 ProSitePatterns ABC transporters family signature. 616 630 IPR017871 GO:0005524
Dod02g0036 723 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 164 444 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g0036 723 PANTHER ABC TRANSPORTER B FAMILY 102 722 - -
Dod02g0036 723 Gene3D - 469 722 IPR027417 -
Dod02g0036 723 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 102 722 - -
Dod02g0036 723 SMART AAA_5 505 694 IPR003593 -
Dod02g0036 723 MobiDBLite consensus disorder prediction 74 97 - -
Dod02g0036 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 478 717 IPR003439 GO:0005524
Dod02g0036 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 718 IPR027417 -
Dod02g0036 723 SUPERFAMILY ABC transporter transmembrane region 150 458 IPR036640 GO:0005524|GO:0016021
Dod02g0036 723 Gene3D ABC transporter type 1, transmembrane domain 145 462 IPR036640 GO:0005524|GO:0016021
Dod02g0036 723 CDD ABC_6TM_TAP 165 452 - -
Dod02g0036 723 Pfam ABC transporter transmembrane region 169 429 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0036 Dod-Chr2 705578 712698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0036 233 721 Calmodulin-binding Proteins AT2G36910 35.248 1.74e-71 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0036 - - gmx:100813359 1122.46