Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0019 ATGTCTGCCAACAACAGAATCCATCCTCCAAACCCAATGTCCTCTGCATCGCTTCTTCTCGTTTTCCTTTGTTACCATGCACTCCTCCTCCGTGTTGCTCTTGCTGATCCAAGAACCACAGAGGCAGCATTCTTGTGCTCCAACAAGACCGCATCAACGCCTGAGCGCCGCGATTTCATATCAAACTTCTGGGAAGCCTTGAACTCCTTGACCCCTCTGGTTGTCAGGCAAGGATATGCAGCTGTTGCTAAAGGGTCTCAGAATGGTACTACTGTCTATGCTTTTGGTGAGTGCATGAGGGATCTTTCTAGGCCAGATTGTGATGTTTGCTTCTCCCTCAGCAAGACACAGATTCAAAGGTGCTCACCATTTCAGAGAGGCGTTGTTGGTGGCAGGCTCTTCCTTGATGGCTGCTATATAAGGTACGATGACTACAACTTCTTCGACGAGAGCCTTGGTAGCCAAGATAGAACTGTGTGTGGGACCAGAAATTTTGGTGGTGATGTGAGTGTCTACAGGGCCAATGCTTTGGAGTTGGTGAGGAATTTGAGCGTGGAAGCTCCAAAGAATGATGGGTTCTATGTGGGGTCTGTGAGTGGAGAAAACGTGAATGTTTATGGGTTGGCTCAGTGCTGGGAGTATGTCAATGGCAGTGCCTGCCACAACTGTTTGGCTGAAGCTGTTAGTAGGATTGAGTCGTGTACACCAAAAGAAGAGGGGAGGGTGTTGAATGCTGGTTGTTACTTGAGGTATTCAACTCAAAAGTTCTATAACAATTCAGGCAACGTCGCCCAAGGAAATCAAGGAGGTAGTAATCTTGCTATAATTGTGGCTGCATCATCTGCCACGGTGGCTCTTCTGCTGGCTGTTGTAACGGCTGCTTTCTTTGTAATGACGAATGTATTGAAGCGGAGGAGAGAAAGAAGACAGTTTGGCGCACTTTTGGACACAGTGAACGAGTCCAAACTAAATACGTCATACGAAGTTCTTGAAAAAGCCACCAATTACTTCAATGATTCCAATAAGCTAGGAGAAGGGGGTTCAGGTTCGGTTTACAAAGGAGTTCTGCCAGATGGAATTAGCGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCAGATCATTTCTTCAATGAGGTCAATTTGATCAGTGGGATTCATCACAAAAATCTTGTAAAGCTTTTAGGATGCAGCATTACAGGACCTGAAAGCCTTCTTGTCTATGAATATGTGCCTAACGGGAGTTTATATGACCACCTTTCTGTTAGAAGGAATTCTCAACTGTTGACATGGGAAGTTAGGCATAGGATCATATCCGGAACAGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACACATAAGAATCATTCATAGAGATATAAAATTGAGCAATGTTCTGCTTGATGATGACTTCACACCCAAGATTGCTGATTTTGGACTTGTTAGATTATTCCCAGAAGACAATTCTCACATTAGCACAACAATTGCTGGTACACTGGGTTATATGGCTCCGGAGTATGTAATTCTGGGGAAGTTAACGGAGAAAGCAGATGTTTACAGTTTTGGAGTTTTAGTCATTGAAATTGTATCTGGCAAAAAGATCAGGTCCTTTGTTCAAAATTCAATCTCCATCCTTCACACGGTTTGGAATCTTTATGGATCAAATAGGCTATGTGACATTGTAGATCCAACACTAGAGGGAAATTATCTAGCAGAGGAAGCATGCAAACTCCTTAAGATAGGACTGCTTTGTGCACAAGCATCCGCAGAGCTGCGACCATCAATGTCAGAAGTAGTGAAAATGATTAATGGCAATCATGAAATCACTCAGCCAACACAACCTCCATTCCTCAATCGTTGTAGTGCAGAGTTCACCAGATCTACTATAGCCCCAGATAGTTTTAAAGCTGGATCCTACAACTACACTCAGTCTTCAGCGTGTAGCATGACCAAAAGTCTGATTGAAGCTTTACAACACAAATCAGAATGCAGAACATTTTAG 2010 0.4378 MSANNRIHPPNPMSSASLLLVFLCYHALLLRVALADPRTTEAAFLCSNKTASTPERRDFISNFWEALNSLTPLVVRQGYAAVAKGSQNGTTVYAFGECMRDLSRPDCDVCFSLSKTQIQRCSPFQRGVVGGRLFLDGCYIRYDDYNFFDESLGSQDRTVCGTRNFGGDVSVYRANALELVRNLSVEAPKNDGFYVGSVSGENVNVYGLAQCWEYVNGSACHNCLAEAVSRIESCTPKEEGRVLNAGCYLRYSTQKFYNNSGNVAQGNQGGSNLAIIVAASSATVALLLAVVTAAFFVMTNVLKRRRERRQFGALLDTVNESKLNTSYEVLEKATNYFNDSNKLGEGGSGSVYKGVLPDGISVAIKRLSFNTTQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNGSLYDHLSVRRNSQLLTWEVRHRIISGTAEGLAYLHEESHIRIIHRDIKLSNVLLDDDFTPKIADFGLVRLFPEDNSHISTTIAGTLGYMAPEYVILGKLTEKADVYSFGVLVIEIVSGKKIRSFVQNSISILHTVWNLYGSNRLCDIVDPTLEGNYLAEEACKLLKIGLLCAQASAELRPSMSEVVKMINGNHEITQPTQPPFLNRCSAEFTRSTIAPDSFKAGSYNYTQSSACSMTKSLIEALQHKSECRTF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0019 669 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0019 669 SUPERFAMILY Protein kinase-like (PK-like) 324 635 IPR011009 -
Dod02g0019 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 651 - -
Dod02g0019 669 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Dod02g0019 669 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 651 - -
Dod02g0019 669 Gene3D - 39 147 IPR038408 -
Dod02g0019 669 Gene3D - 155 256 IPR038408 -
Dod02g0019 669 SMART serkin_6 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0019 669 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Dod02g0019 669 Gene3D Transferase(Phosphotransferase) domain 1 413 617 - -
Dod02g0019 669 ProSiteProfiles Gnk2-homologous domain profile. 153 256 IPR002902 -
Dod02g0019 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Dod02g0019 669 Pfam Salt stress response/antifungal 46 145 IPR002902 -
Dod02g0019 669 Pfam Salt stress response/antifungal 163 253 IPR002902 -
Dod02g0019 669 CDD STKc_IRAK 343 607 - -
Dod02g0019 669 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0019 669 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0019 Dod-Chr2 537316 541513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0019 33 502 Receptor kinase-like Gene Family AT1G70530 59.322 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod02g0019 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0019 - - aip:107643328 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0019 02 537316 541513 Dod02g0019 02 537316 541513 ECH