Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0018 ATGAAGAAAATAGTCCCTCTCATCTCTTCTCAATGCCTTGTTATCCTTATCATCGAATCGCTATTACTATCAGAAACAGTAAAGGCGGAACCAAGGGCCAAGACTGTCCAAATAACATGTGGCCATCAACTAGAGCACAACACCACTATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGCAGTACCGGGTTTGGAACAGCTGTTACAGGCACAGGACCTGATACTAACTATGGCCTGGCTCAGTGCTATGGGGACCTTTCATTACTTGACTGTGTGTTATGCTATGCTGAGGCACGCACGGTTCTACCACAGTGCTTCCCTTATAATGCCGGTCGCATTTTCCTTGATGGTTGCTTCATGAGGGCTGAGAACTATAGTTTCTTTCATGAATACACGGGACCAGGAGACAAGGCTATATGTGGGAACTCAACTAGGAAGAGTTCAAGTTTTCAAGCAGCAGCAAAGCAGGCAGTTTTAACAGCAGTCCAAGATGCAGCCAACAATGATGGCTATGCTAGGGGTGAGGTTGCTGTATCAGGAACAACAAACGAGTCTGCCTATGTTCTGGCTGATTGTTGGAGGACTTTGGACACAGGCTCTTGCAAAGCATGTTCGTATGATGCAGTCAAGTTAGCAAAGTCCCTTCAGCGCAATAGCTTGAACTTCAAATACTCTACACTGGACAAGGCAACTGGATCTTTTGCTGACGCAAACAAATTAGGCCAAGGAGGATTTGGAACTGTTTATAAAGGAGTTCTACCAGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAATGAAGTGAACATAATCAGCAGTGTGGAACACAAGAATCTAGTCAGACTGTTAGGCTGCAGTTGTTCAGGACCTGAAAGCCTGCTTGTGTATGAATATTTGCCCAACAGAAGTCTTGACCGCTTCATTTTTGGTAATAGCCGAACTCATGCATGGAAGCATTTTCAGTCAGGAATGGCCGAACAGTTGTTTGATCCAAACCTACAGTTGGATGACAATGACGACAGCAATATTAAGAAGGAGATTTTGAGAGTGGTTCACATAGGACTCCTGTGCACCCAAGAGAACCATTCACTGCGACCGATGATGTCAAAGGCACTACAGATGCTAACAGAGAAGGAGGAGCACCTTGCTGCTCCGTCCAATCCACCCTTCCTAGATGAGAATACCATGGAACTGCATGACACAAGTGTTGACCCGTTCTTCCCACTCAATGCTGCAGACTCAATTGCCACTATGTCCCATAGCTCTTTCTATCCCAGGCAGAAACTGAGTCACTATTACTATCAGAAACTTCAGTTCCCCAAAATGAAGAAAATAGTCCTCCTTTTCCGTATAACTGAGTTGCTGTTACTATCAGTGGCAGAACCAAGGGCCAAGACAGTCCAAATAACGTGTGGCCATGGCCAAATAACCCTATCTTTGTTCCGAATTTCATTGCAGCCAGCCATGGACAAAACCAGTGAAGAGATGAGCAGTACTGGCTTTGGAACAGCAGTTGCAGGCCTTGGTCAATGCTATGGAGATCTTCCCTTTCACTAA 1611 0.4482 MKKIVPLISSQCLVILIIESLLLSETVKAEPRAKTVQITCGHQLEHNTTIFVPNFVATMEKISEQMRSTGFGTAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNAGRIFLDGCFMRAENYSFFHEYTGPGDKAICGNSTRKSSSFQAAAKQAVLTAVQDAANNDGYARGEVAVSGTTNESAYVLADCWRTLDTGSCKACSYDAVKLAKSLQRNSLNFKYSTLDKATGSFADANKLGQGGFGTVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFGNSRTHAWKHFQSGMAEQLFDPNLQLDDNDDSNIKKEILRVVHIGLLCTQENHSLRPMMSKALQMLTEKEEHLAAPSNPPFLDENTMELHDTSVDPFFPLNAADSIATMSHSSFYPRQKLSHYYYQKLQFPKMKKIVLLFRITELLLLSVAEPRAKTVQITCGHGQITLSLFRISLQPAMDKTSEEMSSTGFGTAVAGLGQCYGDLPFH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 212 331 - -
Dod02g0018 536 Gene3D Transferase(Phosphotransferase) domain 1 314 407 - -
Dod02g0018 536 Pfam Protein tyrosine and serine/threonine kinase 245 329 IPR001245 GO:0004672|GO:0006468
Dod02g0018 536 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Dod02g0018 536 ProSiteProfiles Protein kinase domain profile. 241 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0018 536 Gene3D Phosphorylase Kinase; domain 1 231 313 - -
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 8 212 - -
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 332 424 - -
Dod02g0018 536 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 8 212 - -
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 212 331 - -
Dod02g0018 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 332 424 - -
Dod02g0018 536 Pfam Salt stress response/antifungal 49 132 IPR002902 -
Dod02g0018 536 SUPERFAMILY Protein kinase-like (PK-like) 221 332 IPR011009 -
Dod02g0018 536 Gene3D - 144 230 IPR038408 -
Dod02g0018 536 Gene3D - 33 134 IPR038408 -
Dod02g0018 536 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0018 Dod-Chr2 528999 533677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0018 332 444 Receptor kinase-like Gene Family AT1G70520 59.649 8.46e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod02g0018 PK_Tyr_Ser-Thr 2.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0018 - - sstn:125853877 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0018 02 528999 533677 Dod02g0018 02 528999 533677 ECH