Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0004 ATGTCAACAATGAACCATCTTTTTGATCTTCCAGAACAGATATGTTACGTGCAATGTGGATTCTGCACCACAATTTTAATGGTAAGTGTCCCATGCAGCAGTTTGTCAATGGTGGTGACAGTCAGATGCGGGCACTGCACAAGCCTTCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCTTTACATCTTTTAGCTTCTCTTAGTCATCTTGAGCCAAAAGAAAGTAGTCCAGAAGAGGATGCAACCAACACTCTGAATTGCCATAATGCATCCATGATGACATTCTATTCTGATTATGAGGAAGAGGATGGAACTCCAATGAACATTGTGGTGAACAAACCCCCGGAGAAGCGACAGCGAACTCCATCAGCTTATAACCGCTTCATCAAAGAAGAGATTAAGAGGCTAAAGGCTGAAAACCCTGACATGGCACACAAGGAAGCTTTCAGCACAGCTGCAAAAAATTGGGCTAATTTTCCCCAAACTCAGTGCAAAGTAGATGAAGAGAGCTGTAACCAGACCGAGCAACTTGCGGATCTGGACTCCCAGGTGGACCCTCATGATGCTGAGGTCAATGAAGAAGATCAAGGTTTCCGCGGAAGAAAGATTCCAAGGCATTCCATCATGGAAAGGGCACCGCTTGAATGA 651 0.4424 MSTMNHLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSHLEPKESSPEEDATNTLNCHNASMMTFYSDYEEEDGTPMNIVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPQTQCKVDEESCNQTEQLADLDSQVDPHDAEVNEEDQGFRGRKIPRHSIMERAPLE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0004 216 Pfam YABBY protein 11 165 IPR006780 GO:0007275
Dod02g0004 216 MobiDBLite consensus disorder prediction 182 216 - -
Dod02g0004 216 PANTHER AXIAL REGULATOR YABBY 4 1 183 - -
Dod02g0004 216 PANTHER PROTEIN YABBY 6-RELATED 1 183 IPR006780 GO:0007275
Dod02g0004 216 MobiDBLite consensus disorder prediction 171 216 - -
Dod02g0004 216 SUPERFAMILY HMG-box 112 164 IPR036910 -
Dod02g0004 216 Gene3D High mobility group box domain 111 191 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0004 Dod-Chr2 126557 128946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0004 2 216 C2C2-YABBY Transcription Factor Family AT1G23420 57.205 7.74e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dod02g0004 YABBY 3.7e-64 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0004 K25796 - gmx:100804172 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0004 02 126557 128946 Dod02g0004 02 126557 128946 ECH