Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3757 ATGTCACCTTTCCCTGACGGCCAGAGGCCCGGCAAGGCCGTGGACAAGTCCAATTTCACGCACACCTGTAACCTCTTGAGCCAGTTCTTGAAAGAGAAACGCACTTCTTCTGCAGCTGCCTTAACCCTTCCATTCAGTAGTACTGCGAAAACAGAGACCACTGGGGCAGCTACCATGGATTTGTTAACCAACCTGCAAAATTCGGATGATGCTTCGAGACAAAAAGCTTCAGCTGTGGATTTTCTTCCCCAATTTTTGGAAAACCCCTCCATTAAGCAGTCTAACCTCATCAGGTCTGAAACTCCCCAACCCCAACTGTCGATATTCTACGCTGGAAAAGTGTTAGTGTTTGATGCCTTTCCGCCCGAGAAGGCCACGGAGGTCATGGAGTTAGCCACCAAGCTGGGCTCCGATCTTCCTGAAAATTTGAAACTGCCTCCTCCTACATCAAACACTCCTGCCCAACAGCCTCTTCGATCCGCTCCTCAACAGGCCCCTGATATGAGATACCCGAGGAGAGCTTCGCTTCTCAAATTCCTTGAGAAGAGGAAAGAAAGGGTGATTGCTAAGGGACCTTACAATCTGAACAATCCAAAGCACGATGGAAGCAGTTCAGCTTCAGGAGGTGACCCTGAACATCAGTCGTCCAAACACTTTGACCTCAACTCATAG 672 0.4926 MSPFPDGQRPGKAVDKSNFTHTCNLLSQFLKEKRTSSAAALTLPFSSTAKTETTGAATMDLLTNLQNSDDASRQKASAVDFLPQFLENPSIKQSNLIRSETPQPQLSIFYAGKVLVFDAFPPEKATEVMELATKLGSDLPENLKLPPPTSNTPAQQPLRSAPQQAPDMRYPRRASLLKFLEKRKERVIAKGPYNLNNPKHDGSSSASGGDPEHQSSKHFDLNS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3757 223 MobiDBLite consensus disorder prediction 197 212 - -
Dod01g3757 223 Pfam Jas motif 172 193 IPR018467 -
Dod01g3757 223 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Dod01g3757 223 MobiDBLite consensus disorder prediction 188 223 - -
Dod01g3757 223 MobiDBLite consensus disorder prediction 138 170 - -
Dod01g3757 223 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 6 215 - -
Dod01g3757 223 Pfam tify domain 103 132 IPR010399 -
Dod01g3757 223 SMART tify_2 99 134 IPR010399 -
Dod01g3757 223 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 215 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3757 Dod-Chr1 79278685 79281062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3757 16 210 Tify Gene Family AT1G19180 31.111 5.57e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod01g3757 tify 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3757 K13464 - gmx:100778559 218.394