Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3739 ATGTGGTGGAGATCGGCATCATTCATCCTGGACAGGCAGCAGAACGACGCCGCTTTGAGGCCCGGCTCTGACTTCTCCTCCCTGTCCGTCGCTCCTCCTCCGCCGACCGAATCGTCAACCTCAATGGGAGTGGGAGTGGGCCCCACTGACCCTAAGATTTCGGCCTACTATGAGACGAGGGCGGCCCACCACGGCGTGGTCACCAGCGACTGGCTGGCCCAGGCCCAGGCCGCCGTTGCCCACGACCCCCAATCCCATGTCAATGTCAATGTCAATGTGAGGCCTCCTTCTTCTGAAAAGCCCTTCAGCGTCATTGACGAGTTCAACAACTGGCGCCGCCAGCCCGATCTCGCTGAGGCTGTCGCAGCCATTCGCGCCCTGGCCGCCGTCATTCGCTCCAGCCAGGCCACAACTATGATGCAGCTCGAAATCGAGCTCAAGAACGCCTCCGACTTTCTCAAATCGTGGGATACGACCTCCATCTCGTTGACTGCGGGCTGTGATCTGTTTATGCGGTATGTGACGAGGACTTCTGCTTTAGAATACGAAGACTTCAATTCTGCAAAATCTCGCCTTATTGAACGCGCTGAGAAGTTTGGGGAAATCTCCTACAAGGCTAGGAAAATTATTGCAATGCTGAGTCAAGATTTTATATTTGATGGCTGTACAATCCTCGTTCATGGTTTTTCCAGAGTTGTGTTCGAAGTTCTAAAACTGGCTGCGCAAAATAAGAAACTATTTCGTGTCTTCTGCACAGAGGGAAGACCAGATCGAACAGGATTACGGTTGTCCAATGAGCTGGCTAAGCTTCATGTTCCTGTGAAGCTTCTAATAGACTCTGCAGTTGCATATACTATGGATGAGGTGGACATGGTCTTTGTGGGTGCAGATGGAGTTGTTGAAAGTGGGGGCATAATTAACATGATGGGGACATTCCAAATTGCATTGGTTGCCCATAGTATGAATAAGCCAGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTGGCTCCTGCCTTACGCCCTATTGATTTCGGTGTACCCATTCCATCCAAGGTTGAAGTTGAAAGGTCTGCGCGGGATTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTGACTCCATCTGTTGTTAGTGATGAGTTGATCCAGCTATACTTATAG 1206 0.5033 MWWRSASFILDRQQNDAALRPGSDFSSLSVAPPPPTESSTSMGVGVGPTDPKISAYYETRAAHHGVVTSDWLAQAQAAVAHDPQSHVNVNVNVRPPSSEKPFSVIDEFNNWRRQPDLAEAVAAIRALAAVIRSSQATTMMQLEIELKNASDFLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLHVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTFQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3739 401 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 53 401 - -
Dod01g3739 401 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 53 401 - -
Dod01g3739 401 Gene3D - 101 202 IPR042528 -
Dod01g3739 401 Gene3D - 205 401 IPR042529 -
Dod01g3739 401 MobiDBLite consensus disorder prediction 29 45 - -
Dod01g3739 401 SUPERFAMILY NagB/RpiA/CoA transferase-like 117 400 IPR037171 -
Dod01g3739 401 MobiDBLite consensus disorder prediction 19 46 - -
Dod01g3739 401 Pfam Initiation factor 2 subunit family 115 389 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3739 Dod-Chr1 79035498 79037962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3739 1 401 Eukaryotic Initiation Factors Gene Family AT1G53880 78.803 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3739 K03239 - gmx:100799015 635.18