Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3733 ATGGATTCCATCGACTCCTTCAAGGGGTATGGGAAGGTGGATGAGGCGGAGCAGCAAGCCTTCAAGAACAAGACACGCAAGCGCATCATCATCCTCATTGTCTCCTCCATAGTGCTGGTGGCTATCATCACCGCCGCCGTCGTGGGCACCATCCAACCCAACCGCGGCCACTCCGACATCTCCTCCCCCTCAACGCCGGCATCCTCGCTGAAGGCGGCGTGCGACCTCACTCAGTACCCGAACTCCTGCCTGTCGAGCATCTCCTCTCTCCCAAATTCCAACACCACAGATCCAAAGCAACTCTTCAAGCTCTCTCTCCAAGTCGCCATTGACGAGCTCTCCAAGCTCTCCCAATACCCCTCCAAGCTTCGAGCCACTGCCAAGGACCCCCGCGTCCAGAAGGCCATCGATGTCTGCGGTACCGTCCTCAGTGATGCCCGGGCCAACTTCGACGACTCCTTGTCAGAGCTCGGCGGAGGCGGGAAGCTCCTCCCGGCAACGAAGATCAGCGACATTGAGACGTGGCTGAGCGCTGCCATCACGAACCAGGAAACCTGCTTGGACGCCCTCAAGGAGCTGAACTACACCGCCGCCAACGCCGTACTCGAGGACATGAAAACCGCCATGAAGAACTCGACGGAGTTCTCGAGCAACAGCTTGGCCATTGTGACCAGGATCCTGGGTCTGCTGTCGAAGTCCAACAACCCTGTGCACCGGCGGCTTCTGGGGTTCCCGGAGTGGGTGGGGGTGGCGGAGCGGAGGCTGCTGCAGGATGGGAACGAGCCGGATGCGGTGGTGGCGCAGGACGGGAGCGGCCAATACAAGACGATAAAGGAGGCAGTGGCGGCGGTGAAGAAGAATAGGGACAAGAGATTCATTATACATGTGAAGGAGGGGACTTATGTTGAGAACATTGAATTGGACAAGGACACCTGGAATGTGATGATCTACGGTGATGGCAAGACCAAGACCATCATCTCCGGCAGTCGCAACTTCGTCGACGGCACTCCCACTTATGACACCGCCACTTTCGCTGTAGTGGGAAAGGGGTTCATGGCAAAGGACATAGGGTTCGTGAACAGTGCAGGTGCGGTGAAGCAGCAGGCCGTGGCATTGCGATCAGGGTCGGATCGGTCAGTGTTTTACAGGTGCTCATTTGATGGGTTTCAGGACACACTGTATGCCCATTCCAACAGGCAGTTCTACCGCGAATGTGACATCACAGGCACCATAGACTTCATATTCGGGAATGCGGCTGTGGTGCTCCAGAACTGCAGCATCATGCCCAGGCAGCCCCTGCCAAAGCAGTACAGCACCATCACAGCCCAGGGCAAGAGCGACCCCAACCAGAACACTGGAATTGTAATCCACAAATCTTCATTCTCCGCACTCCCCAATGTTCAGGCACCCACGTACCTTGGCAGGCCTTGGTTTAATTACTCCACCGCCGTCATCATGCAATCTGACATTGGCTCATTCCTGAACCCACTGGGGTGGATTAGCTGGGATGCCGAACATGTCCCTCCGAACACCATTTTTTACGCTGAATACCAGAACACTGGGCCTGGATCAGAGGTCTCGCAACGGGTTAAATGGGCTGGCTATAATCCATCTCTCTCAGAAAGCGAGGCAGCCCAAGTTCGCAGTGCAGTCCTTCATTCAGGGCCCAGAGTGGTTGCCAGCTTCTTCTGTACACTTTGA 1701 0.5626 MDSIDSFKGYGKVDEAEQQAFKNKTRKRIIILIVSSIVLVAIITAAVVGTIQPNRGHSDISSPSTPASSLKAACDLTQYPNSCLSSISSLPNSNTTDPKQLFKLSLQVAIDELSKLSQYPSKLRATAKDPRVQKAIDVCGTVLSDARANFDDSLSELGGGGKLLPATKISDIETWLSAAITNQETCLDALKELNYTAANAVLEDMKTAMKNSTEFSSNSLAIVTRILGLLSKSNNPVHRRLLGFPEWVGVAERRLLQDGNEPDAVVAQDGSGQYKTIKEAVAAVKKNRDKRFIIHVKEGTYVENIELDKDTWNVMIYGDGKTKTIISGSRNFVDGTPTYDTATFAVVGKGFMAKDIGFVNSAGAVKQQAVALRSGSDRSVFYRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVLQNCSIMPRQPLPKQYSTITAQGKSDPNQNTGIVIHKSSFSALPNVQAPTYLGRPWFNYSTAVIMQSDIGSFLNPLGWISWDAEHVPPNTIFYAEYQNTGPGSEVSQRVKWAGYNPSLSESEAAQVRSAVLHSGPRVVASFFCTL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3733 566 SMART PMEI_2 65 222 IPR006501 GO:0004857
Dod01g3733 566 Pfam Plant invertase/pectin methylesterase inhibitor 69 222 IPR006501 GO:0004857
Dod01g3733 566 CDD PMEI-like_3 72 226 - -
Dod01g3733 566 Pfam Pectinesterase 263 547 IPR000070 GO:0030599|GO:0042545
Dod01g3733 566 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Dod01g3733 566 PANTHER PECTINESTERASE 8 549 - -
Dod01g3733 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 227 IPR035513 -
Dod01g3733 566 Gene3D - 259 561 IPR012334 -
Dod01g3733 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 227 IPR035513 -
Dod01g3733 566 PANTHER PECTINESTERASE 1-RELATED 8 549 - -
Dod01g3733 566 SUPERFAMILY Pectin lyase-like 262 547 IPR011050 -
Dod01g3733 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 224 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3733 Dod-Chr1 78979093 78982019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3733 1 555 Carbohydrate Esterase AT1G53840 56.174 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3733 - - gmx:100777128 742.651