Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3732 ATGGATTCCATCAACTCCTTCAAGGGGTATGGGAAGGTGGACGAGGCGGAGCAGCAAGCCTTCAAGAACAAGACACGCAAGCGCGTCATCATCCTCATTGTCTCCTCCGTAGTCCTCGTCGCTCTCATCATCGCCGCCGTCGTCGGCACCGTCGTACACAACCGCCGCTCCTCCTCCGACGATGACGACAGCTCCGCCCCCTCAACGGAGCTGACGCCAGCATCCTCACTAAAGGCGGTGTGCGACGTCACACAGTACCCCAACTCCTGCCTGTCGAGCATCTCCTCCCTCCCAAATTCCAACACCACAGATCCACGGCAACTCTTCAAGCTCTCTCTCCAAGTCGCCATCGACGAGCTCTCCAAGCTGTCCCAATACCCTTCCAAGCTCAGGGCCACCTCCAAGGACCCCCGCGTCCAGAAGGCCATCGACGTCTGCGGAGCCGTCCTCAGCGACGCCGTCGCCAGCTTCAACGACTCCGTGTCGGAGCTCGGCGGCGGCGGGAAGCTCCTCCCTGCGGCGAAGATCAGCGACATTGAGACGTGGCTGAGCGCCGCCATCACGAACCAGGACACCTGCTTGGACGCCCTGGAGGAGCTGAACTCCACCGCCGCCAACGCCATCCGCGAGGACATGAAAACCGCCATGAAGAACTCGACGGAGTTCTCGAGCAACAGCTTGGCCATAGTGACCAGGATCCTGGGGCTGCTCTCGAAGTTCAACAGCCCCGTGCACCGGCGGCTGCTGGGGTTCCCGGAGTGGGTGGGGGCGGCGGAACGGAGGCTGCTGCAGGATGGGAACGCGACTGGGGAGCCGGATGCGGTGGTGGCGCAGGACGGGAGCGGGCATTACAAGACGATAAAGGAGGCTGTGGCGGCGGTGAAGAAGAAGAGCGACAAGAGATTCAGAATATATGTGAAGGCTGGGACTTATGTGGAGAACATTGATTTGGACAAGAACACCTGGAATGTCATGATCTACGGTGATGGCAAGACCAAGACCATCGTCTCCGGCAGCCGCAACTTCATTGACGGAACTCCCACTTTTGAGACCGCCACTTTCGCTGTTAAGGGAAAGGGATTCATTGCAAAGGACATAGGGTTCAAGAACACAGCAGGCGCAGCCAAGCACCAGGCTGTGGCATTAAGGTCAGGGTCGGATCAGTCAGTGTTTTACAGGTGCTCATTTGATGGGTTTCAGGACACACTGTATGCCCATTCCAACAGGCAGTTCTACCGCGAATGTGACATCACAGGCACCATAGACTTCATATTCGGGAACGCGGCTGCCGTGTTCCAGAACTGCAAGATCATGCCCAGGCAGCCGCTATCAAACCAGTTCAACACCATCACGGCTCAGGGGAAGAAGGACCCCAACCAGAACACTGGAATTGTCATCCAGAAATCCTCCTTCTCTGCTCTCGACGATCTTCAGGCCCCCACGTACCTTGGCAGGCCTTGGAAAGACTACTCTACCACCTGTCATCATGCAGTCTGA 1497 0.5792 MDSINSFKGYGKVDEAEQQAFKNKTRKRVIILIVSSVVLVALIIAAVVGTVVHNRRSSSDDDDSSAPSTELTPASSLKAVCDVTQYPNSCLSSISSLPNSNTTDPRQLFKLSLQVAIDELSKLSQYPSKLRATSKDPRVQKAIDVCGAVLSDAVASFNDSVSELGGGGKLLPAAKISDIETWLSAAITNQDTCLDALEELNSTAANAIREDMKTAMKNSTEFSSNSLAIVTRILGLLSKFNSPVHRRLLGFPEWVGAAERRLLQDGNATGEPDAVVAQDGSGHYKTIKEAVAAVKKKSDKRFRIYVKAGTYVENIDLDKNTWNVMIYGDGKTKTIVSGSRNFIDGTPTFETATFAVKGKGFIAKDIGFKNTAGAAKHQAVALRSGSDQSVFYRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAAVFQNCKIMPRQPLSNQFNTITAQGKKDPNQNTGIVIQKSSFSALDDLQAPTYLGRPWKDYSTTCHHAV* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3732 498 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 234 IPR035513 -
Dod01g3732 498 Gene3D - 267 496 IPR012334 -
Dod01g3732 498 Pfam Pectinesterase 273 494 IPR000070 GO:0030599|GO:0042545
Dod01g3732 498 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Dod01g3732 498 ProSitePatterns Pectinesterase signature 1. 298 317 IPR018040 -
Dod01g3732 498 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 231 IPR006501 GO:0004857
Dod01g3732 498 PANTHER PECTINESTERASE 1-RELATED 8 493 - -
Dod01g3732 498 SUPERFAMILY Pectin lyase-like 272 493 IPR011050 -
Dod01g3732 498 PANTHER PECTINESTERASE 8 493 - -
Dod01g3732 498 Pfam Plant invertase/pectin methylesterase inhibitor 76 229 IPR006501 GO:0004857
Dod01g3732 498 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 234 IPR035513 -
Dod01g3732 498 CDD PMEI-like_3 79 233 - -
Dod01g3732 498 SMART PMEI_2 72 229 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3732 Dod-Chr1 78971958 78976010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3732 1 493 Carbohydrate Esterase AT1G53840 61.297 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3732 - - gmx:100777128 711.835