Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3723 ATGGCCATGGGTGACTCGTCGGTTCCAAGTGACAAGTTGGGTGAGTCTCCAGCTGTTGAGTTAACCGGCAAGATCATGGTGGTGGCAATAGTAGTCCTGTTCATGGTAGTTGTGTTTGTTCTGCTCCTCCATCTCTATGCCAAGTGGTTCTCGTGGCGCTTGGGAGAAAGCACCGCCCCGCAAGCTAGGCGCCGCCGCCGCCGCTTTGTGTTTGCCCCTGGTCAAGACCCTGCCAATCACGGCGGTCTCCGAAGGGGTCTTGAGCCTTCTGTGCTTAGGTCCTTACCTGTGTTGGTTTTCCAACCCAAAGATTTCAAGGACGGTTTGGAGTGTGCAGTTTGCCTCTCTGAGGTTGTTGAAGGAGAAAAGGCAAGGCTTTTGCCAAAATGCAATCATGGGTTTCATGTAGATTGCATTGATATGTGGTTCCAGTCCCATTCCACTTGCCCTCTTTGCAGGAACCCGGTAGCTCCAAATGGTGAACAAAATGCCTCAGGGAACAATGAGTCATCATCTGAAGCAGAGGTTTCAGCTGATATGGGTGGCACAGAATCTCCAGTTTTTCCCACAAATGTGTTCATTTGGGGGAACCAGGCACAAGTTAGTTCTAATGGTGCTTCTTTGGAAGAAAGTTCTTCCCAGCCAGCATGCTCCCCGTCCTCTTCAGCAGCTACTACTAGTACTAGTAGTAGTAACAATAATAGATTTAATGGAACGTTGGTGATTGATATACCAAGCGAGATCACTTCATCTTCTTTATCGCCTTCTGCGAGCAGGTTTGCTGAAGATGAGCTGAAATCGCCAATGGCAGCAAGGCTGAGGTCATTGAAGAGGCTTTTGAGCAGGGACAGGAGGTTGAATCCATGTAGTCCAAGTTCCATAGATGTGGAACAAGCAGGGGCAGGACAGGGCTAG 915 0.4951 MAMGDSSVPSDKLGESPAVELTGKIMVVAIVVLFMVVVFVLLLHLYAKWFSWRLGESTAPQARRRRRRFVFAPGQDPANHGGLRRGLEPSVLRSLPVLVFQPKDFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVAPNGEQNASGNNESSSEAEVSADMGGTESPVFPTNVFIWGNQAQVSSNGASLEESSSQPACSPSSSAATTSTSSSNNNRFNGTLVIDIPSEITSSSLSPSASRFAEDELKSPMAARLRSLKRLLSRDRRLNPCSPSSIDVEQAGAGQG* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3723 304 MobiDBLite consensus disorder prediction 284 304 - -
Dod01g3723 304 Pfam Ring finger domain 110 153 IPR001841 -
Dod01g3723 304 SUPERFAMILY RING/U-box 91 159 - -
Dod01g3723 304 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Dod01g3723 304 CDD RING-H2_EL5_like 110 153 - -
Dod01g3723 304 SMART ring_2 111 152 IPR001841 -
Dod01g3723 304 MobiDBLite consensus disorder prediction 160 182 - -
Dod01g3723 304 PANTHER RING-H2 FINGER PROTEIN ATL3 7 297 - -
Dod01g3723 304 MobiDBLite consensus disorder prediction 286 304 - -
Dod01g3723 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 161 IPR013083 -
Dod01g3723 304 MobiDBLite consensus disorder prediction 204 235 - -
Dod01g3723 304 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 297 IPR044675 -
Dod01g3723 304 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3723 Dod-Chr1 78913542 78915637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3723 20 287 C3H Transcription Factor Family AT1G53820 43.434 1.22e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3723 - - adu:107491762 345.125