Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3718 ATGGCAACCGAGCACGATGACGACCTCAAGGACGAGAAGAATCCCCGCCCTCTCGACGAGGATGACATCGCCCTCCTCAAAACCTATGGGTTGGGACCTTATTCCACAAGTATTAAAAAAGTCGAGAAGGAAATCAGAGATATGGCAAAGAAAGTCAACGACTTATGTGGTATCAAGGAGTCTGATACTGGTTTGGCTGCAGCCAAGCCAGTAGCTCGTTGCACAAAGATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTTGTTGGACTGGGTGACAAAGTTTCCCCCACTGACATCGAGGAAGGGATGCGTGTTGGGGTTGATAGAAACAAATATCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAGAAGCCTGATGTAACATATAATGATGTTGGTGGTTGCAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAACTTCCCATGCTCCATCCAGAGAAATTTGTTAAGCTTGGAATTGATCCTCCAAAGGGTGTTCTTTGCTATGGTCCACCTGGAACTGGAAAAACACTTTTGGCTAGGGCTGTGGCTAATAGGACAGATGCTTGTTTTATAAGGGTCATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGTGCTCGGATGGTTCGTGAATTATTTCAGATGGCCCGTTCAAAGAAGGCATGCATCGTCTTTTTTGATGAAGTTGATGCCATTGGAGGTGCACGGTTTGATGATGGTGTAGGTGGTGATAATGAGGTTCAGCGCACAATGCTTGAAATTGTGAATCAACTTGATGGCTTTGATGCTCGCGGAAATATCAAAGTGTTGATGGCAACTAACAGGCCTGACACACTTGATCCAGCACTACTACGACCTGGGCGATTGGACCGCAAAGTTGAGTTTGGGCTTCCCGATTTGGAGAGTAGGACGCAGATATTCAAGATTCACACTAGAACCATGAACTGTGAAAGGGATATCCGCTTTGAACTTTTAGCTCGGCTTTGCCCAAATTCCACTGGAGCTGATATAAGGAGTGTGTGCACTGAAGCTGGTATGTTTGCTATTAGAGCTCGGAGGAAGACCTGTTACAGAGAAAGACTTCCTTGA 1161 0.4453 MATEHDDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIRDMAKKVNDLCGIKESDTGLAAAKPVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTCYRERLP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3718 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 379 IPR027417 -
Dod01g3718 386 Gene3D - 32 140 IPR012340 -
Dod01g3718 386 Gene3D - 322 385 - -
Dod01g3718 386 PANTHER 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG A 5 380 - -
Dod01g3718 386 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 5 380 - -
Dod01g3718 386 Pfam AAA+ lid domain 343 378 IPR041569 -
Dod01g3718 386 Pfam ATPase family associated with various cellular activities (AAA) 188 320 IPR003959 GO:0005524|GO:0016887
Dod01g3718 386 ProSitePatterns AAA-protein family signature. 291 309 IPR003960 GO:0005524|GO:0016887
Dod01g3718 386 CDD AAA 154 321 - -
Dod01g3718 386 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 78 379 IPR005937 GO:0005737|GO:0030163|GO:0036402
Dod01g3718 386 Gene3D - 141 320 IPR027417 -
Dod01g3718 386 SMART AAA_5 184 323 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3718 Dod-Chr1 78877947 78881312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3718 153 374 Calmodulin-binding Proteins AT3G56690 37.220 1.11e-41 154