Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3717 ATGGTGGAGGATAGAAGGCTGGTGCTGCTGTTCATCGGCACCTGCATTCTTCGTTGGATGGCCATTGCTGTCAATGGTAACACAGATCCAAATGATGCTGCCGCTATAAGGACTTTGTTTCAATCTATGAGCTCACTATCCCAGCTAGGTTGGCAAGCTAATGGTGATGATCCGTGTGGACAGCATTGGAAAGGCATAACTTGCTCAGACAACCGAGTTACAGAGATTAAGTTATCTAATCTTGGACTAACGGGGACTTTGCCATACGGATTACAACCCTTGACATCTTTGACGAACCTAGACATGAGTCACAACAATCTTGGAGGTAGCATACCATACCAACTTCCTCCAAAAATGCAGCGCTTAAATCTTGCCTATAACAACTTCACTGGGACAGTCCCTTACTCTATTTCTGACATGACCTCTCTTACAGACCTGAATCTTGGCCATAATCAATTCGACCAAGGACTGAATGTCGACTTTCAAAAGCTTTCTGCCCTCTCCACATTGGATCTCTCTTTCAATTCCTTGACAGGTGACCTTCCGCAGACTTTGAGCTCACTTACAGGCATAACCAGCATGTATCTGCAAAACAACCAGTTTACGGGCACTATTGATGTCCTTGCTAATCTGCCTCTTGAACATCTGAATGTGGAAAACAATAATTTTACAGGATGGATACCGGAACAGTTGAAAAGCATAAATCCGCAAACTGGTGGTAATGCTTGGAACTCGGGACCTGCACCCCCCCCTCCTCCTGGCACACCTCCAGCTCCTAAAAGCAATCATCACCACCAATCTGGTGGTGGAAGTACCAGTTCCTCAGATGTTGGCAGTGACAGCAACACAAGTGAGAGCAAAAAATCTGGTATAGGAGTTGCTGGCATTGCTGGAATTCTGATCTCAGTTATTGTTGTTGGGGCAATAATAGCATTCTTTTTGGTGAAGAGAAAATTCAAGAAGTCATCTTCCGATTTAGAAAAACAGGACAATCAGTCCTTTGCTCCTATTCCGTCAAATGAAGCACATGAAGTGAAGTCTGTGCAAACATCCTCTGTTATTGACTTAAAGACATTGGATGCTCATGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGAAGATGAATTTTCAAAGAAACCCACCAGTGTCAAGAAGACGGTAACAGCTCCTCCAAATTTGAAATCATATTCTATAGCTGATCTTCAGATCGCTACTGGCAGCTTCAGCGAGGATCACCTTGTCGGTGAGGGGTCTTTCGGGCGCGTTTACCGTGCTCAATTTAATGATGGAAAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTTCTTCCCAATGATTTGTCTGAAGATTTTACCACAGTAGTTTCAAACATCTCCCATTTACATCATCCAAATGTAACGGAGCTTGTAGGTTATTGTTCAGAGTATGGGCAACACCTCTTAGTCTACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCCTTGGGAACTGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCGCCATCAGTTGTTCACAAGAATATCAAGTCGGCCAACATATTACTTGATACAGAGCTTAATCCTCATCTTTCAGACTGTGGATTGGCAAGCTATATTCCAAATGCAGACCAGGTATTGAACCATAATGCTGGATCGGGATATGATGCACCTGAAGTTGCCTTGTCTGGCCAGTATACTATGAAAAGTGATGTCTACAGCTTTGGAGTTGTGATGTTGGAGCTTCTAAGTGGACGTAAACCATTTGATAGCTCGAGGCCAAGATCAGAGCAGTCTCTGGTTCGTTGGGCAACTCCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGACCCTGCGCTGAAAGGGTTATACCCTGTTAAATCTTTGTCTCGTTTTGCTGATGTTATTGCCCTCTGCGTTCAGTTGGAGCCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTGGTAAGGTTAGTGCAGCGGGCTAACATGAGCAGGCGAACAACATTTGGAACTGATCAAGGAGGATCCCAGCGAGGGAGTGACGATCCAGCCATACATGACGTGTAA 2166 0.4377 MVEDRRLVLLFIGTCILRWMAIAVNGNTDPNDAAAIRTLFQSMSSLSQLGWQANGDDPCGQHWKGITCSDNRVTEIKLSNLGLTGTLPYGLQPLTSLTNLDMSHNNLGGSIPYQLPPKMQRLNLAYNNFTGTVPYSISDMTSLTDLNLGHNQFDQGLNVDFQKLSALSTLDLSFNSLTGDLPQTLSSLTGITSMYLQNNQFTGTIDVLANLPLEHLNVENNNFTGWIPEQLKSINPQTGGNAWNSGPAPPPPPGTPPAPKSNHHHQSGGGSTSSSDVGSDSNTSESKKSGIGVAGIAGILISVIVVGAIIAFFLVKRKFKKSSSDLEKQDNQSFAPIPSNEAHEVKSVQTSSVIDLKTLDAHASINLKPPPIDRHKSFDEDEFSKKPTSVKKTVTAPPNLKSYSIADLQIATGSFSEDHLVGEGSFGRVYRAQFNDGKVLAVKKIDSSVLPNDLSEDFTTVVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHLSDCGLASYIPNADQVLNHNAGSGYDAPEVALSGQYTMKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGTDQGGSQRGSDDPAIHDV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3717 721 SUPERFAMILY L domain-like 29 231 - -
Dod01g3717 721 SUPERFAMILY Protein kinase-like (PK-like) 391 687 IPR011009 -
Dod01g3717 721 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Dod01g3717 721 MobiDBLite consensus disorder prediction 234 289 - -
Dod01g3717 721 PRINTS Leucine-rich repeat signature 164 177 - -
Dod01g3717 721 PRINTS Leucine-rich repeat signature 97 110 - -
Dod01g3717 721 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 18 717 - -
Dod01g3717 721 ProSiteProfiles Protein kinase domain profile. 415 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3717 721 MobiDBLite consensus disorder prediction 245 259 - -
Dod01g3717 721 Gene3D Transferase(Phosphotransferase) domain 1 494 707 - -
Dod01g3717 721 PANTHER OS01G0253100 PROTEIN 18 717 IPR045271 GO:0004714|GO:0006468
Dod01g3717 721 Gene3D Ribonuclease Inhibitor 29 242 IPR032675 -
Dod01g3717 721 Pfam Leucine Rich repeat 95 109 IPR001611 GO:0005515
Dod01g3717 721 Pfam Protein tyrosine and serine/threonine kinase 419 687 IPR001245 GO:0004672|GO:0006468
Dod01g3717 721 CDD STKc_IRAK 421 690 - -
Dod01g3717 721 MobiDBLite consensus disorder prediction 260 289 - -
Dod01g3717 721 MobiDBLite consensus disorder prediction 699 721 - -
Dod01g3717 721 Gene3D Phosphorylase Kinase; domain 1 376 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3717 Dod-Chr1 78869078 78877671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3717 1 715 Strubbelig Receptor Gene Family AT1G53730 65.837 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod01g3717 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3717 - - aip:107646143 1184.09