Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3710 ATGCTAAAGACTCCACTTTTATTCTTCTTGATATCTGTTCTGATGACAAAGGGAACTTCAAGTCCCAGACAAGGACCAAGAAGACCAATCCCATCAACATCAGGAGGACCCTCTTCCATATTCATGGTTTCCAAGTCAATGATCTTTGTCATAATAGCGTTACTTCTGTCTTGGTTTCTTGTCCAAGTTTCCTCTTCCTCTTGTAACCAACTGGATAAAGACTCGCTCTTGGCCTTCTCCAGGAACATATCCACCCATCCTCCTCTCAATTGGTCTGCTTCTGTTGATTGCTGCCGCTGGGAAGGCATTCTCTGCGATGAGGACAAACCGAATGGGGATATCAGAGTCATCCATCTATTGCTACCATCAAGGGGTCTAACTGGCTTCATCTCACCATCTCTCACAAGCCTCACTGCTCTCTCTCACCTCAATCTCTCCCAAAATCGGTTATCTGGTAGTCTCCCAGACCAGTTTTTCTCATTCCTTGATCACCTGCAGATTCTTGATTTAAGCTTCAATCGACTCTCTGGTGAGCTGCCATCCCATTTTGCCAATAACAGCAGCGGCACTACTACTGGGACTATCCGGGAGCTGGATTTGTCTAGTAATTTATTCACCGGTACACTGCCATCTTCTATCCTTGAGCACCTGGCAGCTGCTGCAATAGGAGGGAGTTTGATGTCTTTCAATGTTAGTAACAATAGCTTCACAGGTCAAATTCCAACTTCTCTCTTTTGCAGTAACAAAAGTAAATCCTCCTCTATCAGATTCCTGGATTATTCCTCCAACCATTTTGATGGCCAGATTCAGCCTGGGCTAGGAGCATGTTCCAAGCTGGAGAAGTTTAGAGCTGGCTTCAATCTTCTATCCGGGCCTCTTCCCAGCGACATTTTTTATGCTGTTGCTCTCACAGAAATCTCCTTGCCCCTCAATAGACTCTCTGGAACCATTGTTGATGGCATCGTTAGCCTTGCCAATCTTACAGTTTTGGAGCTCGACTCCAATAATTTCACAGGCCCTGTTCCCCCGGGCATTGGTAAGCTCTCCAAATTGGAACGGCTACTCCTTCATGTCAACAATCTAACTGGTACTCTCCCCTCATCTCTGGTTAACTGTGTGAATCTTGTCATGTTAAATTTAAGGGTCAACTCCTTGGGGGGAAATATCTCAGCATTCGATTTCTCTGGACTCCTCAGACTTACTACACTGGACCTTGGCAATAATAACTTCACCGGTGTTTTACCACCAACCCTTTATGCGTGCAAGTCACTTATAGCAGTAAGGTTGGCACATAATCAGCTTGAAGGACAGATCTCACCTGACATACTTGGACTTCAGTCTCTGGCTTTCCTATCAGTTTCTGCCAACAACCTGAGCAATGTCACTGGGGCTCTGAGCATACTCACTGGGCTCCAGAATCTTGGTACCCTTATGCTCTCCAAGAATTTTTTCGGTGAAAAGATGCCAGATGATGCAAACATAACAGGCCCATATGGATTCCAAAAGATTCAAGTCCTTGGCTTAGGTGGTTGCAATTTCACAGGTCAAATACCAGGATGGCTCATTAACCTGAAGAAGCTCGAGGCCTTGGATCTGTCCTATAATCAAATTAGTGACTCAATTCCTCCCTGGCTGAGCAGACTTCCTCAACTTTTCTATATAGACTTGTCTCATAACAACCTTACAGGAATGTTTCCCACGGAGCTTACAATGCTTCCAGCACTAACATCACAGCAGGCAAATGATAAAGTAGAAAGGACTTACCTGGAGTTACCTGTCTTTGCTAATGCCAACAATGTTTCCCAGATGCAATATAATCAGCTTTCCAACCTACCACCAGCAATATATCTGGGAAACAATGGCCTCAATGGCAGTATCCCCATAGAGATTGGACTATTGAAAGTCCTTCATCAGCTGGACCTGAGTCATAACAAGTTCTCTGGCAATATCCCAGTTCAAATTTCTAACTTGACAAACTTGGAGAAACTATACCTCTCAGGAAACCAACTCTCTGGTGAAATTCCTGATTCGCTCAAAAAGCTACATTTCTTATCAGATTTCAGTGTAGCATACAATAATCTTCAAGGACCAATACCAACTGGTGGTCAATTTGATACTTTTCTCCCTTCCAGCTTTGAAGGAAACCCACTGTTGTGTGGTTCAGTTGTTCAGCGCTCTTGTCATCCTGAACAAGGTAGTAATGCAAGTGGTCACCGCTCTAACAAAAAACTAGTAATTGGATTTGTCATCGCAGCCTGTTTTGGCACTGTTTCCTTCAATTTAGTGTTGGTAGCGTGGATACTATACAAGAGGAGGATCAATCCACAAGGAGAACCTGACAAAATTGACCCAGAATCGATTTCTGCCAACTCTAACAGTGGAGTTCATCAAGAGGTTGACAAGGAGGCAAGCCTAGTGGTATTGTTCCCCAGTAAAACAAATGAAATCAAGGATCTTACCATATTTGAAATATTAAAAGCTACTGAAAATTTCAGTCAGGCAAACATAATAGGGTGTGGGGGATTTGGTTTGGTTTATAAAGCAACATTGTCAAATGGAACTACTCTAGCCATCAAGAAACTTTCAGGAGATTTGGGTCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCGCAACATGACAATCTGGTTGCATTGCAAGGCTATTGTGTGCACGAGGGCTTTCGGCTTCTCATATATACTTATATGGAAAATGGAAGTCTGGATTACTGGTTGCATGAAAAGGCTGATGGACCATCTGCACTTGATTGGCCTACTCGGCTGAAGATTGCACAAGGTGCAAGTTGCGGATTGGCTTACATGCATGAGATATGTGAACCACACATAGTACATCGTGATATAAAGTCCAGCAATATACTCCTTGATGAAAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCCCGGTTGATTCTTCCTTATCATACTCATGTCACAACTGAACTTGTAGGTACATTGGGTTATATCCCCCCAGAGTATGGACAAGGATGGGTGGCGACTCTGAGGGGAGATGTCTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTCAGTGGGAGGAGGCCTGTTGATGTATGCAAGCCAAAAATGTCAAGGGAATTAGTTGGCTGGGCTCAACAAATGAGGAGCGAAGGAAAACAAGATAAAGTAGTTGATCCTCTTCTGCAAGGTAAGGGCTTTGAAGAAGAGATGCTACAGGTACTTGATGTGGCCTGCATGTGTGTCAACCAGAATCCTTTCAAGAGACCATGCATAACGGAAGTTGTTGAATGGCTGAAGAATGTAGGATCAGTCAACCAACAGAGGAATAAAGACTAG 3348 0.4379 MLKTPLLFFLISVLMTKGTSSPRQGPRRPIPSTSGGPSSIFMVSKSMIFVIIALLLSWFLVQVSSSSCNQLDKDSLLAFSRNISTHPPLNWSASVDCCRWEGILCDEDKPNGDIRVIHLLLPSRGLTGFISPSLTSLTALSHLNLSQNRLSGSLPDQFFSFLDHLQILDLSFNRLSGELPSHFANNSSGTTTGTIRELDLSSNLFTGTLPSSILEHLAAAAIGGSLMSFNVSNNSFTGQIPTSLFCSNKSKSSSIRFLDYSSNHFDGQIQPGLGACSKLEKFRAGFNLLSGPLPSDIFYAVALTEISLPLNRLSGTIVDGIVSLANLTVLELDSNNFTGPVPPGIGKLSKLERLLLHVNNLTGTLPSSLVNCVNLVMLNLRVNSLGGNISAFDFSGLLRLTTLDLGNNNFTGVLPPTLYACKSLIAVRLAHNQLEGQISPDILGLQSLAFLSVSANNLSNVTGALSILTGLQNLGTLMLSKNFFGEKMPDDANITGPYGFQKIQVLGLGGCNFTGQIPGWLINLKKLEALDLSYNQISDSIPPWLSRLPQLFYIDLSHNNLTGMFPTELTMLPALTSQQANDKVERTYLELPVFANANNVSQMQYNQLSNLPPAIYLGNNGLNGSIPIEIGLLKVLHQLDLSHNKFSGNIPVQISNLTNLEKLYLSGNQLSGEIPDSLKKLHFLSDFSVAYNNLQGPIPTGGQFDTFLPSSFEGNPLLCGSVVQRSCHPEQGSNASGHRSNKKLVIGFVIAACFGTVSFNLVLVAWILYKRRINPQGEPDKIDPESISANSNSGVHQEVDKEASLVVLFPSKTNEIKDLTIFEILKATENFSQANIIGCGGFGLVYKATLSNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHDNLVALQGYCVHEGFRLLIYTYMENGSLDYWLHEKADGPSALDWPTRLKIAQGASCGLAYMHEICEPHIVHRDIKSSNILLDEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQGWVATLRGDVYSFGVVMLELLSGRRPVDVCKPKMSRELVGWAQQMRSEGKQDKVVDPLLQGKGFEEEMLQVLDVACMCVNQNPFKRPCITEVVEWLKNVGSVNQQRNKD* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3710 1115 SUPERFAMILY Protein kinase-like (PK-like) 814 1102 IPR011009 -
Dod01g3710 1115 Pfam Leucine rich repeat 502 561 IPR001611 GO:0005515
Dod01g3710 1115 Gene3D Ribonuclease Inhibitor 250 462 IPR032675 -
Dod01g3710 1115 Pfam Leucine Rich Repeat 399 418 IPR001611 GO:0005515
Dod01g3710 1115 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Dod01g3710 1115 Pfam Leucine Rich Repeat 659 681 IPR001611 GO:0005515
Dod01g3710 1115 ProSiteProfiles Leucine-rich repeat profile. 526 549 IPR001611 GO:0005515
Dod01g3710 1115 Pfam Leucine rich repeat N-terminal domain 72 106 IPR013210 -
Dod01g3710 1115 Pfam Protein kinase domain 832 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3710 1115 Gene3D Ribonuclease Inhibitor 463 735 IPR032675 -
Dod01g3710 1115 ProSitePatterns Protein kinases ATP-binding region signature. 837 860 IPR017441 GO:0005524
Dod01g3710 1115 PANTHER LEUCINE RICH REPEAT KINASE 2 49 1109 - -
Dod01g3710 1115 Gene3D Transferase(Phosphotransferase) domain 1 907 1115 - -
Dod01g3710 1115 SUPERFAMILY RNI-like 258 695 - -
Dod01g3710 1115 SUPERFAMILY L domain-like 74 341 - -
Dod01g3710 1115 Gene3D Ribonuclease Inhibitor 191 249 IPR032675 -
Dod01g3710 1115 Gene3D Ribonuclease Inhibitor 71 190 IPR032675 -
Dod01g3710 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Dod01g3710 1115 PANTHER OS06G0692500 PROTEIN 49 1109 - -
Dod01g3710 1115 SMART LRR_typ_2 397 421 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 445 468 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 348 372 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 657 681 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 137 161 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 324 347 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 524 548 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 633 656 IPR003591 -
Dod01g3710 1115 SMART LRR_typ_2 162 185 IPR003591 -
Dod01g3710 1115 PRINTS Leucine-rich repeat signature 524 537 - -
Dod01g3710 1115 PRINTS Leucine-rich repeat signature 165 178 - -
Dod01g3710 1115 SMART serkin_6 831 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3710 1115 ProSiteProfiles Leucine-rich repeat profile. 659 681 IPR001611 GO:0005515
Dod01g3710 1115 Gene3D Phosphorylase Kinase; domain 1 790 906 - -
Dod01g3710 1115 ProSiteProfiles Protein kinase domain profile. 831 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3710 Dod-Chr1 78775197 78779057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3710 14 766 Miscellaneous Gene Families AT1G17240 48.477 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod01g3710 Pkinase 2.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3710 - - gmx:100782574 1726.06