Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3706 ATGGGAGAAAGAGTGCCTGTGGGATACAGATTCCATCCGACTGAAGAAGAGCTTGTGGGTCACTACCTCAAGTACAAGCTGCTGGGTGATGATTCCAATTCCAGTGTGCACAACACTATTGCTGAAGTTGATGTTTGCAAGTTTGATCCTTGGGAGTTGCCAGCGTTTTCCAAGGTAAAATCGGAGGACCGGGAATGGTATTTCTTCAGTCCTCGCGAGTTGAAATACAAAAAGTCAAGTAACAGGTACAACAGGACAACCAAAACTGGCTACTGGAAACCCACTGGTAGAGACCGCAGCATTAAGACACGAGGCACCGACCATGTCATTGGCACCAAGAAGACCCTGGTTTTCTACAAGGGTCCCCCTGGTCGTGCTGTCAAGACCAACTGGGTTATTCACGAATTTCATGCTGCCACAGTTCCTCCTGACAAGAGAACATATGTCTTGTGTCACTTAATGGAGAAAGCTGAGAAAAAAGCAGAAGGAAGACCTGATGTATTGGTCAATGAAGGGGAGCCTATTGCTGCTGATCATGAAAACCGAGCAACAGTTGATCGATCTCAAGATGTATTGAATCTGGAATCAGTCTTTCCAGAACCACCTCAGGCAGATGAAACTGATTTCCCCTCAATACAGTTCTCTCCGTTTGTCATTGAGCAGGAACAATATTTTCAAGATTCCTCATTTTTCGATGCCTGTTTTGGGATTGAAAATAACATTACTCCGTTTCCATTTGATGATACTACTGAAGAGGAAGTCGATGTTGATTTGTTCATGGAATCGATTTTAGTTGATGATGGTTTTATCAGCGAAGAGAGAAGGCATTCTTTTGTTAACAAATCCACCCCCTCACTGTCAATTAGGAAGATACACTATGAAAGCAGCGAAACTGAGGCTGAGCTAGTCTCCGCACAGTTTGGCAACGTTCTGGAGACTACATCAGTGTGTAATGAACATGTTGTTTCAAGCCGATGCCAGGTAATGAAAATGGTTAAAACATCACAAGATGCTACTTATACTGGTCCTCCTCCATTCTCTGCTGAAACTGAAGTAAACCGAGAGAAAAAGGACAGTGCCTCTGATGATAACTTCTGGGGAGTGGACACTTCTGATGACTCAATTTCAAATGAACCCTCCTTGTCTATTTTTGTTTCCGAGAGGTTTAGCTCTCCTTCACCTCCGGTGGCTACTCCTTCAATTTCAAGGAGAGTGAAAACTAAATATCATCCAAGATCCAACAACTCTGTGTCACAGGGAGCTACTTCGAGAAGATCTCAAACTCAGAGAAAGCTTTCGAGCAAAGCAGTAGTATCCCAACATGAGGTGCCGAAGGAAACACAAATGCCGGAGTTGAACAAAGATCAGAAGAAAGCTCAGGATGCCAGGTCCAGCAAGAATTTGGAAACCACAAGCAAATATCAGTCATCAAGTGTCAATAAGAAGGGTTGTTTCATGTACCAGGAGACACCTTCAACGACTCAAAACTCAAATCCCCGCTCGCTATATCTTGTCAATGTAGTTGTTGGGTTTTCATTGCTGATAGTCACTATTTGTGACATGGTATCATTTGGGAAGTGCCGCTAG 1587 0.4367 MGERVPVGYRFHPTEEELVGHYLKYKLLGDDSNSSVHNTIAEVDVCKFDPWELPAFSKVKSEDREWYFFSPRELKYKKSSNRYNRTTKTGYWKPTGRDRSIKTRGTDHVIGTKKTLVFYKGPPGRAVKTNWVIHEFHAATVPPDKRTYVLCHLMEKAEKKAEGRPDVLVNEGEPIAADHENRATVDRSQDVLNLESVFPEPPQADETDFPSIQFSPFVIEQEQYFQDSSFFDACFGIENNITPFPFDDTTEEEVDVDLFMESILVDDGFISEERRHSFVNKSTPSLSIRKIHYESSETEAELVSAQFGNVLETTSVCNEHVVSSRCQVMKMVKTSQDATYTGPPPFSAETEVNREKKDSASDDNFWGVDTSDDSISNEPSLSIFVSERFSSPSPPVATPSISRRVKTKYHPRSNNSVSQGATSRRSQTQRKLSSKAVVSQHEVPKETQMPELNKDQKKAQDARSSKNLETTSKYQSSSVNKKGCFMYQETPSTTQNSNPRSLYLVNVVVGFSLLIVTICDMVSFGKCR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3706 528 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Dod01g3706 528 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Dod01g3706 528 MobiDBLite consensus disorder prediction 335 373 - -
Dod01g3706 528 MobiDBLite consensus disorder prediction 411 436 - -
Dod01g3706 528 ProSiteProfiles NAC domain profile. 5 156 IPR003441 GO:0003677|GO:0006355
Dod01g3706 528 PANTHER FACTOR, PUTATIVE-RELATED 6 510 - -
Dod01g3706 528 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 510 - -
Dod01g3706 528 MobiDBLite consensus disorder prediction 386 400 - -
Dod01g3706 528 MobiDBLite consensus disorder prediction 447 464 - -
Dod01g3706 528 Pfam No apical meristem (NAM) protein 6 137 IPR003441 GO:0003677|GO:0006355
Dod01g3706 528 MobiDBLite consensus disorder prediction 386 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3706 Dod-Chr1 78733341 78736995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3706 3 163 NAC Transcription Factor Family AT4G35580 46.988 1.91e-45 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g3706 NAM 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3706 - - ccaj:109803958 382.874