Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3701 ATGGATTTGGGAGGAGGAGGAGGAGGAGGAGGAGGGAGCAGGGGGGTGATCGGGGACTACATAGTGGGCCCCAGAATTGGGTCTGGTTCATTCGCTGTTGTGTGGCGCGCAAGGCATCGCCACTCGGGCCTGGAGGTTGCCGTGAAGGAGATTGACAAGAAGCAGCTCAGCCCCAAAGTGAGCGACAATCTCCTCAAAGAGATCACTATCCTCCGCACCATCAACCACCCCAACATCATTCGCCTCTTCGAAGCTATTCAGACCAACGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGTGACCTCGCTGCTTACATTAATCGCCACGGCAAAGTCTCTGAAGCCACTGCCAGGCACTTCATGAGGCAATTGGCTGCGGGGTTGCAGGTTCTACAAGAAAAGAACCTCATTCACAGGGATTTGAAACCACAGAACTTTCTGTTGGCAACTACTGCAGCGACACCACTCATGAAAATAGGTGATTTTGGTTTTGCGAGGTCTCTCACACCCCAAGGGTTGGCTGACACACTATGTGGTTCACCATTGTACATGGCTCCAGAGATAATTCAAAACCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTAGGGGCAATATTGTTCCAACTAGTGACTGGGAGGCCACCCTTTGATGGGAATAGTCAATTGCAGCTTTTCCAAAACATTTTAACATCCACTGAACTGCGGTTTCCACCAGAGGCTTTGAAAGAGCTACATTTGGATTGCTTGGATCTTTGCAGAAGCCTTTTACGTCAAAACCCAGTTGAGCGATTAACATTCAAGGAGTTCTTCAATCACAGTTTCCTAAAGGAACCCAGGTCAATTATGCATGTTGAGCAGTCTTTATTGCATCCATCAGAGAGATCAATGGTTCAACAATTAGTTACATCCACTGCTTACAAGGTGTCTCAATTGCATTTTGGGCAGCCATTTGTAGATGATCCAGGGGTAGTCAGTTCAGCTGTCAATGAGACCATGCTATTATTGCAAAGAAACCCTGGCAAGAGAACAGCTGGCCCTCAGAGTGCGGGCAAGTACATAACTGGTGGTTCTCATCTGTCAAAAGAACCCCAAGTTTCCCATTTAATGGAGTCCATTGAGAAAGATTATGTCCTAGTCAATCCTCATTTCACGTCATATGAAGCTTTCTCTGATTACTTTGAGGCATCTGTGCAAGATAATTCCAATTGCAAGGTTTCTATTTCCTCTTCAAAGAGAAGCAATTTGGAAATTGGAGTCGCACAGCAAACAAACGATCCATCCCCTTGCCATGTTGATGGATTAGTAAATTCAAAAGACAATGAACTTGGGGCATCAGCAGCATCCTGTGCATTTGATGTCTTAAGCAAAGTGCATGGTAGTGGAACTTCCTCACTGTGCCCTTCGAACAGGTTAGAGTTGTTGCATCTGTATGTGCAGATCCTTGTGGAGCTTTCATATGAAAAGTATAATGCAGGACTGTATCTAGAATCATTCGCAGTTGAGTTAGTAGTGTTGGCTATATGGAAAAAAGCTCTAGAAATTTGTAACTCCTGGCTGGCCTCCATTAATGAGGGTGTGTTTCCTGGAAGCACTTCAACTAATGAATCCAGAACTTCATGTGGAGATTTGTGTTTATCACAAACCATGGAACAGAAAATAAATTTTAGTGATCCTTCATCAGTCTACCTGTGGGCAAAACAAGGGTTTATTGTTGCAGTTGATCGTGCTGACAAACTATCATGTCATATACAAACTATGGATGGAGCAGCCGAAATGCCAGATGCAATGGAGATCATATTCCAAGAAGCACTCTTCATTGGGAAAAGTGGTGCTGTAGATGAATACATGGAGAACAGAGGTAGTGCAGCTGCATCTTATTCAAAAGCTATGCTTCTACTTTCATTTATTGTGGGAGAAGCAGTGAACCTTCCACTGAACCCTGCATTTTCACTTACTGCTGCTAATAAGAAGCGAATCTTACAATATATTCTCAACTTGCAATCTCATCAAAAATCATCATCAGAGTCTTCTTCCAAAGCAGCCCATATTCTTTAA 2064 0.4404 MDLGGGGGGGGGSRGVIGDYIVGPRIGSGSFAVVWRARHRHSGLEVAVKEIDKKQLSPKVSDNLLKEITILRTINHPNIIRLFEAIQTNDRIYLVLEYCGGGDLAAYINRHGKVSEATARHFMRQLAAGLQVLQEKNLIHRDLKPQNFLLATTAATPLMKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFDGNSQLQLFQNILTSTELRFPPEALKELHLDCLDLCRSLLRQNPVERLTFKEFFNHSFLKEPRSIMHVEQSLLHPSERSMVQQLVTSTAYKVSQLHFGQPFVDDPGVVSSAVNETMLLLQRNPGKRTAGPQSAGKYITGGSHLSKEPQVSHLMESIEKDYVLVNPHFTSYEAFSDYFEASVQDNSNCKVSISSSKRSNLEIGVAQQTNDPSPCHVDGLVNSKDNELGASAASCAFDVLSKVHGSGTSSLCPSNRLELLHLYVQILVELSYEKYNAGLYLESFAVELVVLAIWKKALEICNSWLASINEGVFPGSTSTNESRTSCGDLCLSQTMEQKINFSDPSSVYLWAKQGFIVAVDRADKLSCHIQTMDGAAEMPDAMEIIFQEALFIGKSGAVDEYMENRGSAAASYSKAMLLLSFIVGEAVNLPLNPAFSLTAANKKRILQYILNLQSHQKSSSESSSKAAHIL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3701 687 Gene3D Transferase(Phosphotransferase) domain 1 13 320 - -
Dod01g3701 687 PANTHER BNAC06G18300D PROTEIN 16 404 - -
Dod01g3701 687 PANTHER BNAC06G18300D PROTEIN 468 666 - -
Dod01g3701 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Dod01g3701 687 SUPERFAMILY Protein kinase-like (PK-like) 17 327 IPR011009 -
Dod01g3701 687 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 468 666 IPR045269 GO:0004674|GO:0006914
Dod01g3701 687 ProSiteProfiles Protein kinase domain profile. 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3701 687 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Dod01g3701 687 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 16 404 IPR045269 GO:0004674|GO:0006914
Dod01g3701 687 CDD STKc_ATG1_ULK_like 26 277 - -
Dod01g3701 687 SMART serkin_6 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3701 687 Pfam Protein kinase domain 22 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3701 Dod-Chr1 78572355 78577490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3701 8 281 CBL-interacting serine-threonine protein kinases AT2G30360 36.429 5.91e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Dod01g3701 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3701 K08269 - gmx:100779262 905.59