Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3700 ATGGACGCATATTCCTCTGGGGAAGAGGTGGTTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCACACTAGGTTCCTAGAAGCATTGAAGCTATATGGTCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGAGAAGCTATTAACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCCCGCAAGACCAGTAGTGGTGCCCCATCATCACACAGTGGCACAAAGTACGGAAAGCTTCTCATTTCAGTTGCATCTTCACATGGTAAACAATCATTGGACTTGGAGAAAGAACCACTTCCAGAGGAGCATAATGAAGACGAAAGGCCAACAACTGAAAAAGAAAATAAGGATGAAAGCTGCTCAAAAGCATTCACTGCTCTCCAGGAGGCATCCTGTACATCTGTGTTGTCAGCAAACAAGAATTCAATGCCTATGTCAGTGCAGCTGAGAAATTCATGCACCTTAAGGGAATATATCCCTTCAGTGAAAGATGTAATAGCTCGAGATGAAACAAATGAATCTTATGTCACTACTGAACTTGAAAATCAGAAATTGGAGATACATGATGGCAAACACACACATACTGATGGCACTTGTAAAACCTCCAAGGTGGGGAGTTCTGGTGCTTTACAATCCAACCAGACTGAGAAAGCAGATGGTCTTAATTGTGCATTCACAATAGATGGGATGCAAGGCAATCAGAATTACCCAAGACATGTAACCGTTCATGTTGTTGATGGGAATAATGGAACTAGTCTGCAAAATCCATCACAAGATATGTTGTTTCGAGACTCCATATTTCAGCCAATAGGAGGGGTTAATGGGCAACCAAATATTTTCTCCAATTCAGCTGCATCAAACACAAGTGAAAGTGAAAATAACACAGGAAGATCCTCTATTCATCAATCATTTCCTCCCTTCACACAACATAATCAGGATGATTACCATTCATTTCTTCACATGTCCTCAACATTTTCAAGTCTTATTGTCTCTACATTGATGCAAAACCCTGCAGCGCATGCTGCAGCAAGTTTTGCCGCTACATTTTGGCCCTTTGCAAGTGCAGAATGTTTGGCAAATTCATGCTCGTGTGCTCAAGCTGGTCTTCCATCTACCCAAATTGGTTCTCCTCCAAGTGTGGCTGCTATTGCAGCAGCTACGGTAGCTGCTGCAACTGCATGGTGGACAGCCCATGGACTGCTTCCTTTGTGTGCTCCACTCCATACTGGTTTTGCCTGTCCTACTGCATCAGCAGCTGCAGTTCCCTCAGTGAATACTGGTGAAGCACCACCAAAGACAGAGCAAGGGGATGTTACTCCAGAAAATCCTCCTCTGCAAGATCAGACAATGGATCCAGAATACCAGGAAGCTCTTCAAGCTCAACATTCAGGTTCTAAGTCGCCAGCTGCTTCTTCATCTGAGTTTAAGGAGAGCGGAGTTGGCAAGGTGAATATTTCTTCAAAGGCTACAACTAATCATGAGATGAACCAAGAAATGTCTGAGCACCTTGATTCCGACAAAGTGAAGGGCAGAAAACCAGTTGACCGTTCCTCATGTGGTTCCAACACAACCTCTAGCAGTGAAGAGACTGATGCACTAGAGAAGGATGGAAGAGAAAAGGAAGAGCCCGAAACACCTGATGCAAACCACTTAGCTACTGAGCCTACTAATCGTCGAAGTAGAAGCATTAGCAACCTTACTGAATCTTGGAAGGAGGTCTCTGAAGAGGGGCGACTAGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTACCCCAAAGCTTTTCACCTCCGCATGATTTGACAAATAAGGATCATCAGATGGATAGCAGCAAGGATAACAAGCAAAACAGGGACTGTAAAGATGAAGACCTTGACAGCAAGAAATGCAGTTCTAATTGTGAAGGGGTGCAGAAAAACCTGCAATTTGAAGAGCATGACAATGAGGAGGAGGGACTGCTTACCATTGGTCTTGGACAAGGTAAGCTCAGGAGTCGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTAGAGGCCAACGAATCCCGGGTCGGAACGGCCTGCAACCAAGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGGAGGGGACTCTTCAATTTGA 2259 0.4453 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHTRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGEAINIDIPPPRPKRKPSNPYPRKTSSGAPSSHSGTKYGKLLISVASSHGKQSLDLEKEPLPEEHNEDERPTTEKENKDESCSKAFTALQEASCTSVLSANKNSMPMSVQLRNSCTLREYIPSVKDVIARDETNESYVTTELENQKLEIHDGKHTHTDGTCKTSKVGSSGALQSNQTEKADGLNCAFTIDGMQGNQNYPRHVTVHVVDGNNGTSLQNPSQDMLFRDSIFQPIGGVNGQPNIFSNSAASNTSESENNTGRSSIHQSFPPFTQHNQDDYHSFLHMSSTFSSLIVSTLMQNPAAHAAASFAATFWPFASAECLANSCSCAQAGLPSTQIGSPPSVAAIAAATVAAATAWWTAHGLLPLCAPLHTGFACPTASAAAVPSVNTGEAPPKTEQGDVTPENPPLQDQTMDPEYQEALQAQHSGSKSPAASSSEFKESGVGKVNISSKATTNHEMNQEMSEHLDSDKVKGRKPVDRSSCGSNTTSSSEETDALEKDGREKEEPETPDANHLATEPTNRRSRSISNLTESWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNKDHQMDSSKDNKQNRDCKDEDLDSKKCSSNCEGVQKNLQFEEHDNEEEGLLTIGLGQGKLRSRRTGFKPYKRCSVEANESRVGTACNQGEEKGPKRIRLGGDSSI* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3700 752 MobiDBLite consensus disorder prediction 135 165 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 132 165 - -
Dod01g3700 752 Gene3D - 26 73 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 728 752 - -
Dod01g3700 752 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Dod01g3700 752 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Dod01g3700 752 MobiDBLite consensus disorder prediction 637 676 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 484 539 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 103 119 - -
Dod01g3700 752 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Dod01g3700 752 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Dod01g3700 752 MobiDBLite consensus disorder prediction 323 351 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 86 119 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 574 593 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 467 608 - -
Dod01g3700 752 PANTHER PROTEIN LHY 2 734 - -
Dod01g3700 752 PANTHER SWI/SNF COMPLEX-RELATED 2 734 - -
Dod01g3700 752 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Dod01g3700 752 SMART sant 23 71 IPR001005 -
Dod01g3700 752 MobiDBLite consensus disorder prediction 646 674 - -
Dod01g3700 752 MobiDBLite consensus disorder prediction 540 559 - -
Dod01g3700 752 CDD SANT 26 69 IPR001005 -
Dod01g3700 752 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3700 Dod-Chr1 78562860 78571746 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod01g3700 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3700 K12133 - gmx:778086 1058.51