Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3693 ATGTTGGTCACCCTCGCAGAGTTGTTCTTTGGGGAGCATTTGGAAGTAAATTGTTTGAAGGAAGGTTTCGTTGATACAGAGAGCAGCTTCAAACTCGAGGAGGATGAACAATCTTTGATATCATCGAGCTTAGAAGATAGCATGCCATTCCTGCAGATGCTTCAGGGTGTGGAATCCCCACCATTTTTCCCCTTCAAAGAGCCGAGTTTTCACACACTTTTGAGGCTGCAGCACCTGAAGAAACCATGGGAAGGGATTGCCCACATACCCAGATTGGATCCCCAAAGTCAAGCAATAGAGCTTGAGAGTTGTGTCACCCGTGACAGGGTGGAGATGCAGTCACCATTGAAGTCAGAAAGCAATGAACTTCAACACACACGTTCTTCAACTTTGTGTGCCGAGAAAGTGGGATACGAGTGCAGTCAAGAGCAACCCAAGTCAGGTGAAGATTGTTGCAAAGACACTATTGGAGACTCAGGTGCTGCTGCTTCTGCTTGGGCTAATCCACAGTTATGGCATAAAGGAAGCCCGTGCCCCAAACAACCTCAGGTAGCAACCCGGGAACGGAACAAAAAGAGAAAGAGAGCAAAACAAATCAAGAACAAGGAAGATGTTGAGAACCAGCGCATGACCCACATTGCCGTGGAACGCAACAGGCGGCGCCAAATGAATGACCATCTCAGCGTTCTAAAGTTTCTCATGCCCCCTTCCTATATTCAAAGGGGTGACCATGCATCAATCATTGGGGGTGCGATTGACTTTGTGAAGGAATTGGAACAGCTACTTCAATCCCTTGAGGCACAAAGAAGGATGAGAAAGAACGAAGAGATTGGTTCCAGTGGAACGCCTGATTATGGAATGAGTTCATCCACTGAAGAACCAAACTGTTGGAGTAATCAGGTGAAGGCAGAGAGAAAGTCAGAGGCAGCATCCATAGAGGTCACTGTCATTCAAACCCATGTGAACTTGAAAATCCAGTGCCAAAGGAGACCCGGGCAATTGGTAAAAGCTATAGTTGCATTGGAAGAACTTAGGCTAACTATTCTGCATCTCAACATCACATCCTCAGAGACTTCAGTTCTCTACTCTTTCAATCTCAAGATTGAAGAGGACAGTAAGGTAGGCTCAGCAAATGAAATTGCAGCGGCGGTCGATCACATATTCAGCTTCATTAATGGTAGCTAA 1185 0.4616 MLVTLAELFFGEHLEVNCLKEGFVDTESSFKLEEDEQSLISSSLEDSMPFLQMLQGVESPPFFPFKEPSFHTLLRLQHLKKPWEGIAHIPRLDPQSQAIELESCVTRDRVEMQSPLKSESNELQHTRSSTLCAEKVGYECSQEQPKSGEDCCKDTIGDSGAAASAWANPQLWHKGSPCPKQPQVATRERNKKRKRAKQIKNKEDVENQRMTHIAVERNRRRQMNDHLSVLKFLMPPSYIQRGDHASIIGGAIDFVKELEQLLQSLEAQRRMRKNEEIGSSGTPDYGMSSSTEEPNCWSNQVKAERKSEAASIEVTVIQTHVNLKIQCQRRPGQLVKAIVALEELRLTILHLNITSSETSVLYSFNLKIEEDSKVGSANEIAAAVDHIFSFINGS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3693 394 MobiDBLite consensus disorder prediction 272 295 - -
Dod01g3693 394 CDD bHLH_AtFAMA_like 210 280 - -
Dod01g3693 394 Pfam Helix-loop-helix DNA-binding domain 208 259 IPR011598 GO:0046983
Dod01g3693 394 Gene3D - 187 275 IPR036638 GO:0046983
Dod01g3693 394 Coils Coil 255 275 - -
Dod01g3693 394 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 258 IPR011598 GO:0046983
Dod01g3693 394 PANTHER MAX DIMERIZATION, MAD 21 393 - -
Dod01g3693 394 MobiDBLite consensus disorder prediction 281 295 - -
Dod01g3693 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 274 IPR036638 GO:0046983
Dod01g3693 394 SMART finulus 213 264 IPR011598 GO:0046983
Dod01g3693 394 PANTHER TRANSCRIPTION FACTOR BHLH70 21 393 - -
Dod01g3693 394 MobiDBLite consensus disorder prediction 170 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3693 Dod-Chr1 78430203 78432564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3693 53 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 41.509 2.97e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod01g3693 HLH 4.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3693 - - gmx:100789928 458.759