Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3690 ATGCAGATACAGATGCAGATGCAGGAAGGGGAGCAGATCAAGAAGCAGAAGGATGAGAATGCATGTTCGGGGGAGGTGGCGGTTAGGTGGGAGAGGTTTCTACCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACCCGCCAGATTATCGCTGCTCTTCTTCGTAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAATGGCATGGGAGACATTGAAGAACAAAGCACCTGACATAGATCTTATACTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTTCACTTCTTACTTTAATCATGGAGCATGACATTTGCAAAAGCATTCCAGTCATAATGATGTCTTCACATGATTCAGTTAGCATGGTGTACAAATGCATGTTGAAAGGTGCAGCTGATTTTCTCATAAAGCCTGTTCGGAGGAATGAGCTAAGGAACTTGTGGCAGCACGTATGGAGAAGGCATGCTCTTAGCAGGCCTCCTCCTAGTTTGACGTTGCCACATAATAAACTTGAAGTTGCCACAGAAAACAATGCTACAAGTGATTCTAGTGGTTCAGTGGCTTCCCCGCAGAACAATAATGAATACAGTGAGAAAACAAGTGAGGCTAAAAGCACTTGTACATCGCCAATTTTGGAAGTTGAGAATGCATATATGGAAAACATGCAGGATACCTCCCAACTTAAGAGTTCTTCAAATTTGAGCAATACTGATGCAGTGAAGCATGAAGAGCCTGTTAAATTTGAAAGAGAATCAGCTAAGCATAATAATGAAGCAGGAGAGAAATCAATTATATTCGTATCGGAAGTTGCGAGGTGCAACAAAACTTTTAATTCGATGGTTTTGAGGCTAGACCAAGGCTATGATCAGAATGAGACAGAAAACGAAGAAGTTATAAGAACAGAGTCAATCAAAGCCAATCCTCATATTAATACAGAGATTCATGAATCCAGTGATGAACTGGTGGAACCTTCTAGAGGGGCTATTGACTTGATTGCTACATTTGATAACCTTCCAAAGAGCACTAATGAGAATTGCAGTTTCAATGGTGATAAAGCAACCAAGTCTGATTTTGATACACAATTGGAACTTTCTCTAACAAGAGATTTTCCTGGTAGCTCATGTAAACCTGCAACTGAGGAAAGACAGATATTGAACCATTCAAATGCTTCTGCCTTTTCTCGGTATAGCAGAAGTAAGCTGTTGCAACCACTTTTTCCATCACCATCAATTACTTCTGCTAAATTATCAAATGTCAGCCAGAATTCTGATGATTCCTATCAATTATCTGAAAACACAAGTCCTTTTCTTCAGTTTGGTGGCAAAAACAAAAATCCAAATATGACCACTCTGATCACCGGTCAGACTGGACTAGTAGAACAAAAATCACCAAACAATCAACTTGAGTTCTTTCCTGCTGCTACTGGGCTTACCTCTGATCATAAGTCTACAGAGCATGGTCATGTTTTCCCTTCTATGCTCTATGCACAATCAGGTGTTAATCCCGCATGTACTCCAAAATCTGTGTGCGAGAAAGAGAGTTCTCCATTTCATACTAGTGCTTCTTCCCAGTCCAATCCTGAGAGTCACACCTCAGAATGGCATTGTGATGCTATATATATTTCTGATCAAAATGTAAATGATCAAAGCAATTTGGATTTTGCGAGGCATGACTCTCCTGCTACTGGTCGAGATTGCTGGTACTAG 1725 0.4099 MQIQMQMQEGEQIKKQKDENACSGEVAVRWERFLPRMALRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLMAWETLKNKAPDIDLILTEVELPSISGFSLLTLIMEHDICKSIPVIMMSSHDSVSMVYKCMLKGAADFLIKPVRRNELRNLWQHVWRRHALSRPPPSLTLPHNKLEVATENNATSDSSGSVASPQNNNEYSEKTSEAKSTCTSPILEVENAYMENMQDTSQLKSSSNLSNTDAVKHEEPVKFERESAKHNNEAGEKSIIFVSEVARCNKTFNSMVLRLDQGYDQNETENEEVIRTESIKANPHINTEIHESSDELVEPSRGAIDLIATFDNLPKSTNENCSFNGDKATKSDFDTQLELSLTRDFPGSSCKPATEERQILNHSNASAFSRYSRSKLLQPLFPSPSITSAKLSNVSQNSDDSYQLSENTSPFLQFGGKNKNPNMTTLITGQTGLVEQKSPNNQLEFFPAATGLTSDHKSTEHGHVFPSMLYAQSGVNPACTPKSVCEKESSPFHTSASSQSNPESHTSEWHCDAIYISDQNVNDQSNLDFARHDSPATGRDCWY* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3690 574 MobiDBLite consensus disorder prediction 229 245 - -
Dod01g3690 574 Pfam Response regulator receiver domain 41 152 IPR001789 GO:0000160
Dod01g3690 574 SMART REC_2 39 154 IPR001789 GO:0000160
Dod01g3690 574 PANTHER PRR RESPONSE REGULATOR 239 570 - -
Dod01g3690 574 PANTHER PRR RESPONSE REGULATOR 30 235 - -
Dod01g3690 574 SUPERFAMILY CheY-like 33 169 IPR011006 -
Dod01g3690 574 MobiDBLite consensus disorder prediction 513 536 - -
Dod01g3690 574 Gene3D - 37 266 - -
Dod01g3690 574 CDD psREC_PRR 41 144 - -
Dod01g3690 574 MobiDBLite consensus disorder prediction 229 261 - -
Dod01g3690 574 PANTHER TWO-COMPONENT RESPONSE REGULATOR 239 570 IPR045279 GO:0009736
Dod01g3690 574 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 235 IPR045279 GO:0009736
Dod01g3690 574 MobiDBLite consensus disorder prediction 246 261 - -
Dod01g3690 574 ProSiteProfiles Response regulatory domain profile. 40 158 IPR001789 GO:0000160
Dod01g3690 574 MobiDBLite consensus disorder prediction 182 214 - -
Dod01g3690 574 MobiDBLite consensus disorder prediction 518 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3690 Dod-Chr1 78407297 78413284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3690 10 264 Response Regulator Gene Family AT5G24470 53.506 2.26e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g3690 Response_reg 9.9e-22 CL0304