Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3682 ATGTCGGAAAGTATGAGTATTTCTGTGAATGGACAACGTCGAGTCCCTCCAGGGTTCTGGAAAGCCACTGGGCGCGACAAGCAGATATACAGCAACGGGAAGAGGATTGGAATGAGAAAGACTTTGGTTTTGTACAAAGGTCGAGCCCCCCACGGTCAAAAATCTGAATGGATCATGCATGAATACAGGCTAGATGACACTACTAGCACCAGCGACACCAATTTCATAAGCAAACTTTATATTTAG 246 0.4512 MSESMSISVNGQRRVPPGFWKATGRDKQIYSNGKRIGMRKTLVLYKGRAPHGQKSEWIMHEYRLDDTTSTSDTNFISKLYI* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3682 81 Gene3D NAC domain 3 80 IPR036093 GO:0003677|GO:0006355
Dod01g3682 81 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 17 70 - -
Dod01g3682 81 Pfam No apical meristem (NAM) protein 12 64 IPR003441 GO:0003677|GO:0006355
Dod01g3682 81 SUPERFAMILY NAC domain 12 77 IPR036093 GO:0003677|GO:0006355
Dod01g3682 81 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 70 - -
Dod01g3682 81 ProSiteProfiles NAC domain profile. 1 81 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3682 Dod-Chr1 78292597 78292842 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3682 12 66 NAC Transcription Factor Family AT2G46770 83.636 5.56e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g3682 NAM 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3682 - - gmx:100793308 113.235