Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3680 ATGTCGGAAAGCATGAGTATTTCTGTGAATGGACAATGTCGAGTCCCTCCAGGCTTCCGGTTTCATCCAACAGAAGAGGAGTTGTTGCTGTACTACTTGAGGAAGAAGGTGTCCTCTGAGAAAATTGACCTCGATGTGATTCGCGACGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGAAAAGTGCAAAATAGGAAGCAGCCCCCAAAATGATTGGTACTTGTTCAGCCACAAAGATAAGAAGTATCCCTCGGGAACAAGAACCAACCGCGCCACAGCTGCAGGGTTCTGGAAAGCCACTGGACGCGACAAGCAGATATACAGCAACGGAAAGAGGATCGGAATGAGAAAGACTTTGGTTTTCTACAGAGGTCGAGCCCCCTATGGCCAAAAATCAAAATGGATCATGCATGAATACAGGCTAGATGACACTACTAGCACCAGCAACACCAATTTCGTGTCCAATAATGTGATGGGAGATGCAGCCCATGAAGAAGGGTGGGTGGTGTGTAGAACATTCAAGAAGAAGAACTATCTCAAAGGCGTAGAAAGCCCCTTAGCCTCCTCATCCATTATCAGTGGGGAAACCAGAAGAAGCAACTTGTATGATTCTTGTGATGAGGGAGCTTTGGAGCAAATACTTCACCAAACGGGAAGAGGTAGCAGGGAAGAGAATCACGAAGAAGCCATGGATCGGATGGTTGCATTCCAGCTGAATGGGGAAAGCGACGAAGGTTCTAGACAATTGGCTTGCTTCAATGATGACCTCATCAACATGGGCTATTGCACAGGGGCTGGCCAGCATTATCTGCAGTTCCCTAGCCTCCAATCCTCATCAACGCCAACGCACAGCATGGTTGCTGCTTACGAATATGGTACCGATCCCATCACACAGAATTTTACTAGCGAGATTGACCTGTGGAACTTTGCCCCAACCCCAACCACATCGTCCTTCTTGTCAACCTCAGCACCAACCCCTGTCGAATATTCCAGTGTAATACAGTAA 1011 0.4758 MSESMSISVNGQCRVPPGFRFHPTEEELLLYYLRKKVSSEKIDLDVIRDVDLNKLEPWDIQEKCKIGSSPQNDWYLFSHKDKKYPSGTRTNRATAAGFWKATGRDKQIYSNGKRIGMRKTLVFYRGRAPYGQKSKWIMHEYRLDDTTSTSNTNFVSNNVMGDAAHEEGWVVCRTFKKKNYLKGVESPLASSSIISGETRRSNLYDSCDEGALEQILHQTGRGSREENHEEAMDRMVAFQLNGESDEGSRQLACFNDDLINMGYCTGAGQHYLQFPSLQSSSTPTHSMVAAYEYGTDPITQNFTSEIDLWNFAPTPTTSSFLSTSAPTPVEYSSVIQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3680 336 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Dod01g3680 336 SUPERFAMILY NAC domain 9 177 IPR036093 GO:0003677|GO:0006355
Dod01g3680 336 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Dod01g3680 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 202 - -
Dod01g3680 336 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Dod01g3680 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3680 Dod-Chr1 78261207 78262866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3680 1 310 NAC Transcription Factor Family AT2G46770 51.955 9.85e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g3680 NAM 1.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3680 - - gmx:100793308 368.237