Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3672 ATGGGGAGTGGGGAGAGGAGTAGTATGAAGGGATTTCATTTGCCTCGCCCTCTTCATCATCAAGGGGGGCATGGGAAAAAGCAAGAGGCGAGATCATCATCAGTTAGAGATCATCATCATCAGGTGCCGAAGGGGTGTCTGGCAATAAAGGTGGGGCAATTAGGAGAGGAGCAAGAGAGGTTCGTGGTGCCGGTCATGTACTTCAACCACCCTCTCTTCATGCAGCTTCTGAAGGAGGCAGAGGAAGAATACGGCTTCGACCAGAAGGGAACCATAACCATCCCTTGCCATGTTCAGGAGTTCAGGAACATCCGTGGCATCATTGATAGGGAGAGGTCCACCTTCCATCACCACCACCATCTTGGCTGCTTCGGTTTCTGA 381 0.5171 MGSGERSSMKGFHLPRPLHHQGGHGKKQEARSSSVRDHHHQVPKGCLAIKVGQLGEEQERFVVPVMYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVQEFRNIRGIIDRERSTFHHHHHLGCFGF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3672 126 Pfam Auxin responsive protein 30 104 IPR003676 GO:0009733
Dod01g3672 126 PANTHER SMALL AUXIN-UP RNA-RELATED 35 120 - -
Dod01g3672 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 120 IPR003676 GO:0009733
Dod01g3672 126 MobiDBLite consensus disorder prediction 1 42 - -
Dod01g3672 126 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3672 Dod-Chr1 78186842 78187609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3672 40 122 Calmodulin-binding Proteins AT5G20810 43.373 6.23e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3672 K14488 - tcc:18613917 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3672 01 78186842 78187609 Dod07g2102 07 52226159 52226968 PCT