Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3671 ATGTTGGGCAGTGGAGCAAAACGCTTCAAACATATTCCGCTCTCATCATATCATCACCACCCTAGAAGGCAAGTGCTCAACAAAGATGCGCACGTGCCTAAAGGGTGCTTGGCAATCAAGGTGGGACAAGGTGAGGAAGAGCAACGGAGAATTATGGTGCCCGTGAATTACCTCTACCACCCGCTATTCGCTCAGCTGCTGGGGAAGGCGGAGGAAGAGTATGGCTTTCATCAGCAGGGAACCATTAGTATCCCTTGTCAATTCGAGGAGTTTATGTCCATCCAAGACCTCATTCATAGGGACAACAGGTCCCTCCAAAACCACCACCACCATCATCTAGCTGCTTGCTTCAGGGCTTTGATATATGCTTGA 372 0.4946 MLGSGAKRFKHIPLSSYHHHPRRQVLNKDAHVPKGCLAIKVGQGEEEQRRIMVPVNYLYHPLFAQLLGKAEEEYGFHQQGTISIPCQFEEFMSIQDLIHRDNRSLQNHHHHHLAACFRALIYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3671 123 Pfam Auxin responsive protein 26 94 IPR003676 GO:0009733
Dod01g3671 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 115 IPR003676 GO:0009733
Dod01g3671 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 21 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3671 Dod-Chr1 78173009 78174226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3671 31 107 Calmodulin-binding Proteins AT3G43120 45.000 2.74e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3671 K14488 - cit:102614790 130.183