Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3663 ATGATTCTCCGGAACCCCATATTCCTCATAGCCCTGGCCGTTCCCCTCTTATTCCTGATTAGGGCGCTGCTGTTCCGAACGGGATTAATATACACCCTAAAGAAGCTATGGAGAACCATCCAAGACTGGTTCCACGTGTACCAGTTCTTCAAGGTCCCTCAACACAACGAAACTACCGCCCGGGAGAATCACCTCTACAGGAAGGTCTCTCTCTACTTGCATTCCCTCCCTTCCATCGAAGACTCTGATTTCACCAGCCTCCTCACCGGCAAGAACCAAAACGAAATCGTTCTCCGCCTCGGCCCCAACCAAGCCATCCAGGACCGTTTTCTCGGCGCCACAGTGTTCTGGCTCAACCAAGCCTTCGACGATGATGATCCCCAATCCAAAGCCTTTGTTCTCAAGATCAGGAAGGCGGACAGGCGCCGAATCCTCCGCCCCTACCTCCAGCACATCCACGCCGTCGCCGACGAAATCGAGCAGCAAGGGAAGCGCGATTTGCGCCTTTTCATGAACTCCGCCGGAGACGGAGGACGACGCTGGAGATCCGTGCCCTTCACCCACCCTTCCACGTTCGAAACCCTAGCCATGGAGCCCGATATCAAGAGCCTTGTCAAATCCGATCTCGAATCGTTCCTCAAAGCCAAGCAGTACTACCACCGGCTAGGCCGCGTGTTGAAACGGAGCTTCCTCCTGTACGGCCCCTCCGGCACAGGAAAATCGAGCTTCGTCGCTGCCATGGCCAATTTCCTCTGCTACGACGTCTACGACATCGACCTCTCCAAGGTTTCCAGCGATTCGGATCTGAAACTGCTTCTCCTTCAAACGACGCCGAAATCGATCGTGGTCGTCGAGGACCTTGACCGGTTCCTGGCGGAGAAATCGACGGCGGTGAGCTTGTCGGGGATGCTGAACTTCATGGACGGCGTGGTGAGCTCGTGCTGCGGCGAGGAGAGGGTGATGGTGTTCACCATGAACAGCAAGGAAAACGTGGACCCGAATCTGCTTCGGCCAGGTCGGGTCGACGTGCACATCCATTTTCCGCTTTGCGATTTCTCGGCCTTCAAGACGCTGGCGAGTAGCTACCTTGGGGTGAAGGAGCACAAGCTTTTCCCTCAGGTGCAAGAGATTTTCCAGAACGGTGCGAGTCTCAGCCCCGCCGAAATCGGCGAGTTGATGATCGCAAATCGGAACTCGCCGAGTCGGGCCATCAAGTCGGTCATCACCGCCTTGCAAACGGACGGCGATGGGAGGGGGTGCGGGCCCATCGCACGGCAGATAGGGGATGATGCCGTAGACGAGCCTGACGCGGTGATGTGCGGTGAGGGTCTCCATAAGGTTAAGGATTTGCGGAAACTGTACGGTTTTTTCAGATTGAAGAATATCAGAAGATCTCCATCATCCAATAGTTCACTGGCAAGCCCCTTGCGGTGA 1434 0.5586 MILRNPIFLIALAVPLLFLIRALLFRTGLIYTLKKLWRTIQDWFHVYQFFKVPQHNETTARENHLYRKVSLYLHSLPSIEDSDFTSLLTGKNQNEIVLRLGPNQAIQDRFLGATVFWLNQAFDDDDPQSKAFVLKIRKADRRRILRPYLQHIHAVADEIEQQGKRDLRLFMNSAGDGGRRWRSVPFTHPSTFETLAMEPDIKSLVKSDLESFLKAKQYYHRLGRVLKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDIDLSKVSSDSDLKLLLLQTTPKSIVVVEDLDRFLAEKSTAVSLSGMLNFMDGVVSSCCGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSAFKTLASSYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGCGPIARQIGDDAVDEPDAVMCGEGLHKVKDLRKLYGFFRLKNIRRSPSSNSSLASPLR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3663 477 CDD AAA 227 349 - -
Dod01g3663 477 Pfam ATPase family associated with various cellular activities (AAA) 231 349 IPR003959 GO:0005524|GO:0016887
Dod01g3663 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 410 IPR027417 -
Dod01g3663 477 PANTHER BCS1 AAA-TYPE ATPASE 8 442 - -
Dod01g3663 477 PANTHER BNAC04G00800D PROTEIN 8 442 - -
Dod01g3663 477 Gene3D - 346 411 - -
Dod01g3663 477 Pfam Domain associated at C-terminal with AAA 32 118 IPR025753 -
Dod01g3663 477 Gene3D - 182 345 IPR027417 -
Dod01g3663 477 SMART AAA_5 226 351 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3663 Dod-Chr1 78020296 78022592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3663 184 363 Miscellaneous Gene Families AT5G53170 26.943 6.40e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3663 - K08900 gmx:100805212 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3663 01 78020296 78022592 Dod07g2095 07 52079159 52081356 PCT