Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3653 ATGGATTCTGGTGCTGTATTGCCTTTGAGCAATGGATTCAAAACAATGGATCCTCCTGATTTTGAGGAAGATTATTTTGTGGAGAAAGATCCTACCGGCCGGTATCTTAGGTACAATGAAATCTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTCATGGAATAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCCTGCAGTCAACAGATGATATTGCAAAATTGTATTCTGAAGTTAATCTATTGAAGTCTCTAAAACATGAAAACATCATTAAGTTCTATAATTCCTGGATTGATGATGAGAAGAAAACTGTTTACATTATTACCGAGCTCTTCACATCTGGAAATTTAAGGCAATATCGCAAGAAGCACAGGTATGTTGACATGAAAGCCATAAAAGGTTGGGCTAGACAGATTCTTCAAGGCTTGGTGTATCTTCACAGTCACAAGCCCCCTATTATTCACAGAGACTTGAAATGCGACAACATATTTGTAAATGGGAACCACGGAGAAGTCAAGATAGGAGATCTTGGTTTAGCAATTGTGATGCAGCAACCAACTGCTCGAAGTGTTATCGGGACCCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAGTACAATGAACTTGTCGACGTCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTTTTGAGTACCCATATAGTGAATGCAAGAATCCAGCCCAAATTTACAAGAAAGTTACCTCTGGCATCGAACCTGCTTCCCTTAAAAGGGTGAGTGATCCTACAATTAAAGAGTTTATCAAGAAATGTCTTGTTCCTGCATCTGAGAGATTGTCTGCAGAGGAGCTTCTTAAAGACCCATTTCTGCAAGTCGAGAGTCCCAAGGATCCAATCCTTGATCCCTTACACTCACCTAATAGATCTCCAAAAGCTATAGATCAGCCCAAATCTGGTCATTTATCTATGGACCTCGATGCTGACTACAAACATCTCTATATGAGTACCTGTGCTGAAAGCAGCCAGGGAAGTCCGCATTGTCCAGTTCTTGAAGTGCAGAGGACATATAAGAACAATGAGTTTAGATTGAAAGGGACCAAAAATGATGATAATTCAGTGTCATTAATCTTGCGTATTGCTGAGTCATGTGGTAAAGTAAGGAACATACATTTTCTGTTTTACCTTGATACAGATACTGCAGTCTCCGTGGCATCAGAGATGGTTGAAAATCTGGAGCTGGCAGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATGATGAAACTTCTACCTGGGTGGAAGCCCTCATCTGACACTTCCTCGAGTGAAGGATTTAGTCAGTGTGGTGGGTCACCAACACTTGGAGATGGCCAAACCTTGATGCCATGCCCATGGGGTTATGACCAAAACAGCCATCCCCCTGAATTGGTTTTCGACCAAGATAACTTATCCAGGTTTAATTCTACCCAAAGAGAAGGTTTTCAGGCAGCTGAGGGGAGCTGCATGTTTAACAATGCTGAAAATGCTGCTTTTGAAGGGTATAATTCTTCTCCTAGTTTGGCCAGCTTGGAAGATCAATACTCACAAGAATCCGAGATAATTGTTGAAGATACTTGCATGAAAAATGACAACTGTCTTGATTATGACATTGATGGGAGCTGCAAAGGATTAAGTTGGTCCACCTCTGAACTGGAACTTGGGGGTACATTTTGGGAAGGTTGTAGATTGCAGACTACAGATCAGTGCAGTGTTGGAGAAGGCATGGTACTAAATGAACTCTCAAAGGACTCACACTCTACAATCCCAGCTTTTTGGGGAACGTCTAATGTTTTGAGCTTGACAAGCAGGTGTTCTTCTCTGTCTTTAGCTGACAAAGAGAATGACCATGAGCTAAAGCATGAACTTGAAGCAATTGAATCACAGTATCAGCACTGGTTTGAGGAACTTTCTAGAATGAAGTTGGAGGCATTGGAAGCCACCAGAAGGAGATGGATAGCAAAAAAGAAATTGGCTGCTCATTGA 2040 0.4147 MDSGAVLPLSNGFKTMDPPDFEEDYFVEKDPTGRYLRYNEILGKGAFKTVYRGFDEVHGIEVAWNQVRIDELLQSTDDIAKLYSEVNLLKSLKHENIIKFYNSWIDDEKKTVYIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHSHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMVTFEYPYSECKNPAQIYKKVTSGIEPASLKRVSDPTIKEFIKKCLVPASERLSAEELLKDPFLQVESPKDPILDPLHSPNRSPKAIDQPKSGHLSMDLDADYKHLYMSTCAESSQGSPHCPVLEVQRTYKNNEFRLKGTKNDDNSVSLILRIAESCGKVRNIHFLFYLDTDTAVSVASEMVENLELADHDVAFIAELIDYLMMKLLPGWKPSSDTSSSEGFSQCGGSPTLGDGQTLMPCPWGYDQNSHPPELVFDQDNLSRFNSTQREGFQAAEGSCMFNNAENAAFEGYNSSPSLASLEDQYSQESEIIVEDTCMKNDNCLDYDIDGSCKGLSWSTSELELGGTFWEGCRLQTTDQCSVGEGMVLNELSKDSHSTIPAFWGTSNVLSLTSRCSSLSLADKENDHELKHELEAIESQYQHWFEELSRMKLEALEATRRRWIAKKKLAAH* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3653 679 ProSiteProfiles Protein kinase domain profile. 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3653 679 Pfam Protein kinase domain 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3653 679 Gene3D - 374 446 - -
Dod01g3653 679 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
Dod01g3653 679 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 429 IPR024678 GO:0004674|GO:0005524
Dod01g3653 679 SUPERFAMILY Protein kinase-like (PK-like) 31 294 IPR011009 -
Dod01g3653 679 MobiDBLite consensus disorder prediction 299 323 - -
Dod01g3653 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Dod01g3653 679 SMART serkin_6 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3653 679 Coils Coil 641 661 - -
Dod01g3653 679 Gene3D Phosphorylase Kinase; domain 1 21 117 - -
Dod01g3653 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 679 - -
Dod01g3653 679 PANTHER KINASE DOMAIN PROTEIN 10 679 - -
Dod01g3653 679 CDD STKc_WNK 34 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3653 Dod-Chr1 77928726 77933143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3653 618 679 MAP Kinase Kinase Kinase AT5G41990 38.710 5.69e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod01g3653 Pkinase 2.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3653 K08867 - gmx:100272197 902.508