Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3647 ATGGATATCCATGCTGAGGCGAAGGCAAGGACCCATCAACCTTGCGCAGCTTGCAGGATGCTACGGCGGAGATGTGACAGTAAGTGCCTACTTGCTCCATATTTCCCAACTGACGAGGTTGATAAATTTGTTGGAGTGCACAAAGTGTTCGGTGCTAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGACGAAGAGAGAGGATGCAGTTAAAGCCATGGTGTATGAGGCCATGGCAAGGCTTAGAGACCCAGTTTATGGCAGTGCTGGAGCTATTTTCCATTTACAAAAGATGATTGAGGAACTGAAAGCGCAGCTGGAATCAATAAGAACACGGGTTTCAGAGTTGCGAGAACAAAAAGACCAGTTGTTGAGCATCCATAACAACAAAACTGCTTATGGTCATCTCGATAATCCTCTCTTTCCCATGAATGACTCTATCGCTGATGGTTACAGTACTTGGTCAGCAGACATAGATCAACTCATGGCACTTGAATTTCCCGTAGAAGGTGACTGGATATATGACGATAGTATTATACGTTAA 546 0.4451 MDIHAEAKARTHQPCAACRMLRRRCDSKCLLAPYFPTDEVDKFVGVHKVFGASNVIKMIQMVEETKREDAVKAMVYEAMARLRDPVYGSAGAIFHLQKMIEELKAQLESIRTRVSELREQKDQLLSIHNNKTAYGHLDNPLFPMNDSIADGYSTWSADIDQLMALEFPVEGDWIYDDSIIR* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3647 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 4 162 - -
Dod01g3647 181 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Dod01g3647 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 162 - -
Dod01g3647 181 Coils Coil 93 127 - -
Dod01g3647 181 Pfam Lateral organ boundaries (LOB) domain 14 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3647 Dod-Chr1 77855811 77857055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3647 14 146 AS2 family AT1G07900 50.370 2.13e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod01g3647 LOB 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3647 - - ccaj:109796546 241.121