Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3639 ATGTTGCCCTTCCGGGGAAAGAACTGGGAAGTCCAGCAATTATTTCAAGTGGTCCCAAAGAATCTACTTCCGTTGTTGCATGTGAAACTGGGAATGGTCAGAATTCCAATTACTCACTGTCCAATAAGGAACAGAAGCAAATTATTTCTGATGCGTCGCCCACTGAGAAACCTTGCAAGGCTGACCTCTGTACCATCCATGAGGACTCGGACTAAGGTGCAAATGCAAGGCGTAGCTGTTGGCCGGGCGGTTGACTTGACCTTGTTAAAAGGGTATGATGATCTAATTGATGAGCTTGAGAAACTATTTGATATCAAGGGAGAGCTTCGGTCACAAAACAAATGGGCAGTTACTTTTACCGATGATGAAGATGACATGATGCTCGTTGGTGATGATCCATGGCCGGAGTTCTGCAACATGGTGAAGCGGATTTTCATCTATTCAAGGGAGGACGTAAAGAAGATGAAATGCAAGCTTTCTGCACCTTCATCTGATGGTGAAGAGACTTTGTTGAGCCCAGATTCACAGACTAAGGATGAGGCTCAGCAAATCTCTTATGCATAA 564 0.4468 MLPFRGKNWEVQQLFQVVPKNLLPLLHVKLGMVRIPITHCPIRNRSKLFLMRRPLRNLARLTSVPSMRTRTKVQMQGVAVGRAVDLTLLKGYDDLIDELEKLFDIKGELRSQNKWAVTFTDDEDDMMLVGDDPWPEFCNMVKRIFIYSREDVKKMKCKLSAPSSDGEETLLSPDSQTKDEAQQISYA* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3639 187 PANTHER AUXIN RESPONSE FACTOR 9 64 162 - -
Dod01g3639 187 Pfam AUX/IAA family 111 149 IPR033389 -
Dod01g3639 187 Pfam AUX/IAA family 71 104 IPR033389 -
Dod01g3639 187 MobiDBLite consensus disorder prediction 159 187 - -
Dod01g3639 187 Gene3D - 64 156 - -
Dod01g3639 187 SUPERFAMILY CAD & PB1 domains 65 144 - -
Dod01g3639 187 MobiDBLite consensus disorder prediction 165 187 - -
Dod01g3639 187 ProSiteProfiles PB1 domain profile. 68 151 IPR000270 GO:0005515
Dod01g3639 187 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 64 162 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3639 Dod-Chr1 77774037 77774946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3639 66 155 B3 DNA Binding Superfamily AT4G23980 80.000 4.04e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod01g3639 AUX_IAA 2.2e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3639 K14486 - gmx:100795763 201.06