Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3636 ATGAAGATAGAGGTTGGGATTGGGCGCGTGGTGTGGCACGACGACGAGAAGGCCATGGTGACAGCTGTACTCGGACGACGCGCCTTCGATTTCTTGGTGACAAACTCGGTTTCGAATGAGAGCCTGTTAATGGCCGTTGGGAGCGACGAGAGCCTCCAGAACAAGCTCTCCGATCTGGTGGACCGCCCCAACGTCGCCAATTTCAGTTGGAACTACGCGATTTTCTGGCAGCTCTCGCAGTCCAAATCCGGCGACTGGGTTCTTGGCTGGGGTGACGGCTGCTGCAGAGAGCCCAACGAGGAGGAAGAGGAAAGTGGCGGCGTCAGAGGGATTCTGAGCCTCCGCATCGAGGACGAGACGCAGCAAAGGATGAGGAAGAGGGTGCTGCAGAAGCTGCACACAGCTTTCGGTGGTTCCGATGAGGACAATTACGCTTTTGGCCTAGACCGCGTAACTGACACCGAGATGTTCTTTCTGGCTTCCATGTACTTCTCTTTCCCACGCGGGCACGGTGGGCCAGGTGAGTGCTTTGCGTCCGGGAAGCACCTCTGGCTCCCGGACGCATTGAAATCTTCTGCATCATCTGATTACTGCGTGCGGTCTTTCTTGGCTAAATCCGCTGGGTTTCAGACTATTGTTTTGGTTCCTACTGATTTGGGTGTGTTGGAGTTGGGTTCCGTGAGGGCGCTTCCGGAGAATTTTGAACTCTTGCAGGCCATCAAATCCGCGTTCTCTTCGCAGCCATCATCAGCGTATTCTGTTCCTGGGGCTAAGCCTCTTTTGTCATTGCCTGTTGTGAGTGACAAGAGGGATGAGAATGCAGTTTTCACTGGTTTGGCTATTGGGGACCATAACAATAATAACAAGGTTGAAGGGGTTCCTAAGGTTTTTGGGAATCCTGTGACTTCGGGTAGGTCCCATTTCAGGGAGAAGCTTGCTGTTAGGAAGATGGAGGAGAGGCCTTGGGGAGGCCATGGTCCTAATGGGAGTACCATTAACTTTCCCAATGGTCCTAGGAATGGTGTTCATGGTTCAGGCTGGGGAGGGAATCATCATCATCATCAACAACAACAACAACAAGGTGGTGGTGGTGGCGTGAGTGTGAGTGTGAGGCAGCCTGTCCCTACTGAGATTTTTGCCCCTAGGACATCTGCCAGCAATGTTCCAGAGCTGGCTAAAGGAGGTGGTGGTGGTGGTGGTGTGAGGCAGGATTTTAGGCTTGACAGCTATCAACCTCAAAGGCAGGTGCAAATGCAGATTGATTTCTCGGGAGCCACTTCAAGGCCTTCTGTGAGGCCTGTGGTTGCCGAATCGGATCTCTCTGATGTTGAGGCCTCCTGCAAGGAGGAGCAACCGAGCACTGCCGATGAGAGGAGGCCCAGGAAGCGGGGCAGGAAGCCTGCTAATGGGAGGGAGGAACCCCTCAATCATGTGGAAGCGGAGAGGCAACGGCGAGAGAAGCTGAATCAGCGGTTCTATGCCCTGCGGTCTGTTGTGCCAAACATCTCCAAGATGGACAAGGCATCGTTGCTGGGTGATGCCATTGCCTACATCAATGAGCTTCAGGCAAAGCTCAAGATGATGGAGTCTGAAAGGGAGAGACTTGGAAGCACTTCGAGGGATGGATCGGCGCCGGAGGCCAGGCAAAGAGCAGAAAGTCATCAGAGTGGAGCTCCTGATATGGACATTCAAGCTGCACAAGATGAGGTCATTGTTAGGGTGAGCTGCCCCGTTTATGCTCACCCAGTTTCAAGAGTAATCCAAACATTCAAAGAGGCACAAATCAGTGTTCTAGAGTCAAAACTCGCCGCTGCAAATGATACTGTCTTTCACACCTTTGTAATTAAGTCCCAAGGACCTGAACAGCTTACAAAGGACAAGTTGATTGCAGCCCTTTCCCGAGAGTCCAACTCCATGCAGCAATTGTCATCGGTTGGATAG 1941 0.527 MKIEVGIGRVVWHDDEKAMVTAVLGRRAFDFLVTNSVSNESLLMAVGSDESLQNKLSDLVDRPNVANFSWNYAIFWQLSQSKSGDWVLGWGDGCCREPNEEEEESGGVRGILSLRIEDETQQRMRKRVLQKLHTAFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGECFASGKHLWLPDALKSSASSDYCVRSFLAKSAGFQTIVLVPTDLGVLELGSVRALPENFELLQAIKSAFSSQPSSAYSVPGAKPLLSLPVVSDKRDENAVFTGLAIGDHNNNNKVEGVPKVFGNPVTSGRSHFREKLAVRKMEERPWGGHGPNGSTINFPNGPRNGVHGSGWGGNHHHHQQQQQQGGGGGVSVSVRQPVPTEIFAPRTSASNVPELAKGGGGGGGVRQDFRLDSYQPQRQVQMQIDFSGATSRPSVRPVVAESDLSDVEASCKEEQPSTADERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQAKLKMMESERERLGSTSRDGSAPEARQRAESHQSGAPDMDIQAAQDEVIVRVSCPVYAHPVSRVIQTFKEAQISVLESKLAAANDTVFHTFVIKSQGPEQLTKDKLIAALSRESNSMQQLSSVG* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3636 646 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 1 637 - -
Dod01g3636 646 PANTHER MYC 1 637 IPR045084 GO:0003700|GO:0006355
Dod01g3636 646 CDD bHLH_AtAIB_like 469 541 - -
Dod01g3636 646 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 472 521 IPR011598 GO:0046983
Dod01g3636 646 MobiDBLite consensus disorder prediction 319 405 - -
Dod01g3636 646 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 244 IPR025610 -
Dod01g3636 646 MobiDBLite consensus disorder prediction 421 483 - -
Dod01g3636 646 Pfam Helix-loop-helix DNA-binding domain 476 522 IPR011598 GO:0046983
Dod01g3636 646 MobiDBLite consensus disorder prediction 350 366 - -
Dod01g3636 646 MobiDBLite consensus disorder prediction 442 483 - -
Dod01g3636 646 SMART finulus 478 527 IPR011598 GO:0046983
Dod01g3636 646 Coils Coil 518 538 - -
Dod01g3636 646 Gene3D - 465 537 IPR036638 GO:0046983
Dod01g3636 646 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 475 537 IPR036638 GO:0046983
Dod01g3636 646 MobiDBLite consensus disorder prediction 530 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3636 Dod-Chr1 77693246 77696520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3636 5 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.773 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod01g3636 bHLH-MYC_N 2e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3636 - - adu:107491937 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3636 01 77693246 77696520 Dod07g2075 07 51832823 51835596 PCT