Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3634 ATGAACTCGTCGTCCGTTGGGCGGTGCAAGCGCAACGCCGGCCCCAAGTGGCGCTGCGGCGAGGCGGCGTCGCCGGGGAAATCATTCTGCGACAAGCACTTGCAGCAGCGTCAGAATCATAGCCAGAAACGCAGAATTCAGAGGAACGCTGCGGAGCACATATCCAAGAAGAAGGCCACCGTGACCGCGAGGACGCCAACAATCACCGATGAGCTCGTTGCCGGAGTCGAATTGGAAGCATCGGAATCTGAATTGACCGGGAACTCCGCTAGAAATCAAAACCCGAACGACAACAACAACAGCAAGAATAAGAAGAAGATGAAGGAACTGATTGATCAGGACGATGAAGATGCTTGTGATGGTCTTGATGTCGCCTCTGACAAGGGACTGATGAGCGTGTACCATGTCAAGAAAAGTTCACGAGCCAAACACGGACTCGAAGATACCAAACAAGTGGGTTTAACCAGCAAAACCAGGGAGGGTGGAAGTTTGATGTGTCATCAGTGTCAGCGGAATGATAAGAGTGGAGTTGTCTTTTGCTCACGTTGCAACAGAAAACGCTATTGTTATGAATGCCTTGACAAGTGGTACCCAGGGAAAAGCCGGGAGGATGTTGAGAATGAATGTCCATTTTGTTGTGGCAATTGCAACTGCAAAGCTTGCTTGCGGGAGGTTCCGGAGCTTAGGCTCCGAGACGTAAATGCCAGCATCAAATTACATCGATTGCTGTACTTACTCTGGAAAGCCCTGCCAGTTCTTAGGCATATTCATGGGGAGCAGAGCTTAGAATTAGAGATTGAAGCCAAAATAAGGGGTAATCAACTGCAAGAAATTGACATAGCAAGAACAAAGCTAGACAAAAGTGAGCGCTTATACTGTGACAATTGCAGCACATCCATAATTGGATTTTACCGAAGCTGCCCCAACCCCAGTTGCTCTTATGATCTATGTCTCATGTGCTGTAAAGAGCTCAGAGAGGGTTGCCAACCTGGAGGCACAGAGGCTGAAACATCCCATGAACAATTTGCAGAGAGAGCCCGTACTCATGATTCAACAAGAACTCAGAGTAAAGAACAAAGTAAAAGATATGGGTGGGAGAGCCAGCATGCACCTACTAATTTTGATTTTCAAGCTGACATGTCAACTCCCTTCCCTGAATGGATAGCTAATAGTGATGGCAACATTCCATGTCCTCCAAAACAGCGTGGAGGTTGTGGTACTGCATTGCTAGAACTGAAACGCATGTTCAAAGCTAATTGGGTAGTGAAATTGCTAAATAATGCTGAGGACCTCACAGGAGACTATATGCCATTGGATGTTGATATCAATGAAAAGTGTTCTTTATGTGAGAAAAATACTATTGAAGGAAAAACCAATCTTGAAGCCCGGAGGGCAGCATTCAGGGATGACAGTAATGATAATTTCATATATAGCCCAAATGCCCTTGACATTTCTGATGATGATATTGAGCATTTCCAAAGGCATTGGATGAGGGGAGAACCGGTGGTTGTGAGAAATATTCTAGGCAAGACGTCAGGCCTGAGCTGGGAGCCGATGGTTATGTGGAGGGCTTTCAGAGAAACAGGTTCCAAAGTGAAGTTCAAAGAGGAAACACGAAGTGTGATGGCCATTGATTGCTTGGATTGGTGTGGGGTTGAGATCAATATTCACCAATTTTTCAAAGGCTACCTAGAGGGCCGAAGGCATCAAGATGGATGGCCAGAAATGTTGAAATTGAAAGATTGGCCTTCATCAACTACTTTTGAAGAGCGTTTGCCCAGGCATGGCACTGAGTTCCTAATGGCACTCCCCTATAGGGACTACACTGATCCGAAATCAGGTCTTTTGAATTTTGCCACTAAACTTCCTGATGACTCGCTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTCTCTGAAGAGCTTGGTAGAGGAGATTCTGTGACAAAGCTGCATTGTGATGTGTCTGATGCGGTCAATGTGCTGACACACACAACCAAGGTAAATATAGCTCCCTGGCAGAGAGAAATCATAAAAAAATTGCAGAAGAAATATGCTGAAGAAGACTCTCGTGAACTTTTTTATGGAGCATTAGGAGATACTGATGAAAGGCCTATATTGAAAGCATTGAATCATGATCTAAAAGCAGAGAGCGGAGTTAATAATATTTCACCAAGTAGCCAAGTGGATCAATGCATTTCATCTATAGCTGAACACATCAGTCAGAAGTTAGAACCAAATGATCAATCTGCAAGTAGCTTGGATTCAAGTAATATCAGCAATAAGGAAGACAAAATGAGGGTTGATCTTCTAGATGATAAAGTGTCTGGTGATCCTGAGGTTAGAGAGTCAAAACAAGGCCTGGTGAAAGATTCTTTGAAAACTGGAAATGGAGCTGAGGTTGCCCTTGGTGGTGCTGTTTGGGACATCTTCCGACGACAAGACGTCCCTAAGCTAATTGAGTACTTAAGAAAGCACAAGAAGGAATTCCGTCATATCAAAAATCATCCTGTAGATTCTGTTATACATCCTATTCATGATCAGACTCTGTTCTTAAATGAGAAACATAAGAAGCAGCTGAAAATGGAGTACAATGTTGAACCGTGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTTATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAATCGTGTATAAAGGTTGCACTTGATTTTGTTTCTCCGGAAAATGTTGGAGAATGTTTACGACTAACTGAAGAGTTTCGTTTGCTTCCGAAATACCACAGAGCCAAGGAGGATAAATTGGAGGTTAAAAAGATGACCCTTTATGCTGTAAGTATGGCTGTTAGAGAAGTCAAAGAACTGATGCAGGTCACTGAGTAA 2883 0.4398 MNSSSVGRCKRNAGPKWRCGEAASPGKSFCDKHLQQRQNHSQKRRIQRNAAEHISKKKATVTARTPTITDELVAGVELEASESELTGNSARNQNPNDNNNSKNKKKMKELIDQDDEDACDGLDVASDKGLMSVYHVKKSSRAKHGLEDTKQVGLTSKTREGGSLMCHQCQRNDKSGVVFCSRCNRKRYCYECLDKWYPGKSREDVENECPFCCGNCNCKACLREVPELRLRDVNASIKLHRLLYLLWKALPVLRHIHGEQSLELEIEAKIRGNQLQEIDIARTKLDKSERLYCDNCSTSIIGFYRSCPNPSCSYDLCLMCCKELREGCQPGGTEAETSHEQFAERARTHDSTRTQSKEQSKRYGWESQHAPTNFDFQADMSTPFPEWIANSDGNIPCPPKQRGGCGTALLELKRMFKANWVVKLLNNAEDLTGDYMPLDVDINEKCSLCEKNTIEGKTNLEARRAAFRDDSNDNFIYSPNALDISDDDIEHFQRHWMRGEPVVVRNILGKTSGLSWEPMVMWRAFRETGSKVKFKEETRSVMAIDCLDWCGVEINIHQFFKGYLEGRRHQDGWPEMLKLKDWPSSTTFEERLPRHGTEFLMALPYRDYTDPKSGLLNFATKLPDDSLKPDLGPKTYIAYGFSEELGRGDSVTKLHCDVSDAVNVLTHTTKVNIAPWQREIIKKLQKKYAEEDSRELFYGALGDTDERPILKALNHDLKAESGVNNISPSSQVDQCISSIAEHISQKLEPNDQSASSLDSSNISNKEDKMRVDLLDDKVSGDPEVRESKQGLVKDSLKTGNGAEVALGGAVWDIFRRQDVPKLIEYLRKHKKEFRHIKNHPVDSVIHPIHDQTLFLNEKHKKQLKMEYNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVGECLRLTEEFRLLPKYHRAKEDKLEVKKMTLYAVSMAVREVKELMQVTE* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3634 960 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g3634 960 MobiDBLite consensus disorder prediction 763 788 - -
Dod01g3634 960 ProSiteProfiles JmjC domain profile. 611 922 IPR003347 -
Dod01g3634 960 MobiDBLite consensus disorder prediction 82 100 - -
Dod01g3634 960 MobiDBLite consensus disorder prediction 82 105 - -
Dod01g3634 960 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 16 766 - -
Dod01g3634 960 SMART cupin_9 592 922 IPR003347 -
Dod01g3634 960 ProSiteProfiles Zinc finger RING-type profile. 166 212 IPR001841 -
Dod01g3634 960 MobiDBLite consensus disorder prediction 338 364 - -
Dod01g3634 960 ProSiteProfiles WRC domain profile. 3 48 IPR014977 -
Dod01g3634 960 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 766 IPR045109 GO:0032454|GO:0033169
Dod01g3634 960 MobiDBLite consensus disorder prediction 747 788 - -
Dod01g3634 960 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 751 958 - -
Dod01g3634 960 MobiDBLite consensus disorder prediction 332 366 - -
Dod01g3634 960 Pfam JmjC domain, hydroxylase 806 905 IPR003347 -
Dod01g3634 960 MobiDBLite consensus disorder prediction 747 762 - -
Dod01g3634 960 SUPERFAMILY Clavaminate synthase-like 488 949 - -
Dod01g3634 960 Gene3D Cupin 480 931 - -
Dod01g3634 960 Pfam WRC 6 44 IPR014977 -
Dod01g3634 960 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 751 958 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3634 Dod-Chr1 77659979 77665995 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod01g3634 JmjC 1.7e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3634 K15601 - mnt:21406261 1102.81