Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3624 ATGATATGGGGGAAACGCATAGCAGGTGGTGCTCTAAAGCCAACCGATGTCGACATGCTGTGGGTTCATGTAACATGCGCTTGGTTTCGACCTGAAGTTCTTTTCAAAAACCATGAGGCAATGGAACCTGCTTCTGGAATCCTTAGAATTCCTCCCGACTCCTTTTTGAAGATTTGCGTGATCTGTAAACAAAGCCATGGTTCGTGTACAAGTTGTTGCAAGTGTGCTACTTATTTTCACGTGATGTGTGCATCGAGAATGGGATATAGCATGGAATTGCATTCCGTTGAGAAGAATGGGAGACAAAAAACGAAGAAGCTAATATATTGTGCAATTCACAGGGTCCCAAAGCCAGAGTCAGTACTGGTTGTACATACACCCCAGGGAGTATTCTCCCCCGGAACATCGGTTCAAAATCACGAGAGACGCTTCAAGGGATCAAGGCTAGTTTCATCCAAGAATGTAGAACTCCTTGAATCTTCAACATCTCAAAGTAATGAGGTGGGGCCACTGTCTGCTGCCAGGTGTCGTGTGTACATAAGGTCTACTAATAAGTTCAACCACCATTTCTTTTTGTTAATTTTTAATTTAAAACCATATCTCGTGATTATTCTAAATTTCAGTGTTTTGGGGTTTCAGAAAACTGAAAACCGTAGAGTTTGCTTAGGAAAATCTGGTATCCACGGATGGGGCCTCTTTGCTCGTAGAGATTTACAAGAAGGAGAAATGGTTGTGGAGTATCGTGGCGAGCAAGTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCAAAGTATCGTCTAGAAGGCAAAGATTGTTATGAGAGCCGGATTGTTCTTATTGCCAAGACCAATGTTTCTGCTGGTGAAGAATTAACGTATGATTACTTGTTCGATCCAGATGAGCGGGATGAACTGAAAGTTCCCTGCCGATGTAAAGCCCCCAGTTGTAGGAAATTCATGAATTAG 963 0.4299 MIWGKRIAGGALKPTDVDMLWVHVTCAWFRPEVLFKNHEAMEPASGILRIPPDSFLKICVICKQSHGSCTSCCKCATYFHVMCASRMGYSMELHSVEKNGRQKTKKLIYCAIHRVPKPESVLVVHTPQGVFSPGTSVQNHERRFKGSRLVSSKNVELLESSTSQSNEVGPLSAARCRVYIRSTNKFNHHFFLLIFNLKPYLVIILNFSVLGFQKTENRRVCLGKSGIHGWGLFARRDLQEGEMVVEYRGEQVRRSVADLREAKYRLEGKDCYESRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCRCKAPSCRKFMN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3624 320 SMART set_7 218 301 IPR001214 GO:0005515
Dod01g3624 320 ProSiteProfiles Post-SET domain profile. 304 320 IPR003616 -
Dod01g3624 320 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX3 7 272 - -
Dod01g3624 320 SMART PostSET_3 304 320 IPR003616 -
Dod01g3624 320 ProSiteProfiles Extended PHD (ePHD) domain profile. 1 114 IPR034732 -
Dod01g3624 320 Gene3D SET domain 272 320 IPR046341 -
Dod01g3624 320 ProSiteProfiles SET domain profile. 218 295 IPR001214 GO:0005515
Dod01g3624 320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 115 IPR013083 -
Dod01g3624 320 PANTHER PHD FINGER PROTEINS 273 320 - -
Dod01g3624 320 SUPERFAMILY SET domain 211 317 IPR046341 -
Dod01g3624 320 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX3 273 320 - -
Dod01g3624 320 Gene3D SET domain 204 271 IPR046341 -
Dod01g3624 320 PANTHER PHD FINGER PROTEINS 7 272 - -
Dod01g3624 320 Pfam PHD-zinc-finger like domain 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3624 Dod-Chr1 77567695 77570531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3624 9 100 C2H2 Transcription Factor Family AT3G14740 35.417 1.96e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3624 - - gmx:100793624 451.055