Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3611 ATGGAAGATGCCATCTATGGGGAGCAACTTAGTCTCATCAATGAACTAATCCAAGGGAAGGAGCTAACAAAGCAGCTGTGTAACCATCTTGTCTCATCTTCTCCATCATCCTATGGGACCAATGAATTCTTGATTGATAGAATACTTTCCACCTATGAGAAAGCACTCACCATGCTGAACTGGGAGTCTAATGTGGGAGACACTAAGAACACCAGCAGCAACATGAGGAATAATTCCAATTGCTCTTCCACAAATGGGAGCCCCAGAAGTGATGAGGAGGAGATGGACGAAGAATTCAAGCACAAACCTGCCTTCAAGAAGAGAAAGACCATGCCCAGATGGACAGAGCAAGTGAAGATCTGCTCAAAAACGGGACTTGAGGGGTCTTTGGATGATGGATATAGCTGGAGAAAATATGGGCAAAAGGATATCCTTGGAGCTAAGTTTCCCAGAGGATATTACAGATGCACACATAGAAATGTACAAGGGTGCCTAGCAACAAAGCAGGTTCAAAAATCAGATGAAGACCCAACAATAATTGAGGTGACCTACAGAGGAAGACACACATGCGTCCAAGCTAAGCATTTACACAAAGCATTCCCATCAAAAACAAAGATGGGATTGGGGGAGAACCAAGTCCACAAAGATCAAAACAGCCAATCACAACAGCTGAAAATGGAGGAACCCCCAGAGGCAATTTTCACCTTTGAGGAGGTTAAATCAGAGGCCTTGGACACTGACACCAAGGAGGATATCTTCCCGTGGTATTGCTTCCTTTCTCCACCAATAGGATCAGAAAACGAGGACAACAACGTCTTATCTGGGACCATGACGGAGAACCATTTCATGGAAAGCTTCTCTCATGCATTCATATCACCAGCAACAACAGAATCAAACCTTTTCTGTATGTCAGCATGCCATTTGGGCTGCACTGGACTAGTCCAAAACATGCAAACCTCAGAATCTGATATCACTGAGATAGTTTCTGCCCCAACTTCAGTCACCAACTCCCCAATCCTGGACTTGGATATGTTGCTTGACAAAGGGGATTTCGACACTGATTTCCCTTTCAACACCCCCGAATATTTCTCTTCATAA 1098 0.4426 MEDAIYGEQLSLINELIQGKELTKQLCNHLVSSSPSSYGTNEFLIDRILSTYEKALTMLNWESNVGDTKNTSSNMRNNSNCSSTNGSPRSDEEEMDEEFKHKPAFKKRKTMPRWTEQVKICSKTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQKSDEDPTIIEVTYRGRHTCVQAKHLHKAFPSKTKMGLGENQVHKDQNSQSQQLKMEEPPEAIFTFEEVKSEALDTDTKEDIFPWYCFLSPPIGSENEDNNVLSGTMTENHFMESFSHAFISPATTESNLFCMSACHLGCTGLVQNMQTSESDITEIVSAPTSVTNSPILDLDMLLDKGDFDTDFPFNTPEYFSS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3611 365 SUPERFAMILY WRKY DNA-binding domain 129 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g3611 365 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 358 IPR044810 GO:0003700
Dod01g3611 365 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g3611 365 MobiDBLite consensus disorder prediction 67 104 - -
Dod01g3611 365 MobiDBLite consensus disorder prediction 67 88 - -
Dod01g3611 365 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 358 - -
Dod01g3611 365 Gene3D WRKY domain 116 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g3611 365 MobiDBLite consensus disorder prediction 89 104 - -
Dod01g3611 365 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g3611 365 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3611 Dod-Chr1 77458099 77460838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3611 13 201 WRKY Transcription Factor Family AT5G24110 44.271 1.88e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g3611 WRKY 8.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3611 - - gmx:100790050 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3611 01 77458099 77460838 Dod07g2054 07 51420986 51424483 PCT