Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3586 ATGAGTGGTGTGGCTGGACTGGACCCCCACAACGCAAGACGCGTAGATGGATTCTGCTGCGACCACGTGTACGGCTGTGGTGACGTTGGAATAAACAACTTGGCCAGCGCGATTAGCGATGGGCCAGCTCAACAACCACCACACCCATTCCGAACCGTATATACGGCGTACGTATACGCCACCTTCTACATACGACACGTGTACGGTAAAATTCTGCTACTTTGCTTGTCGGGATTTCGTGAAAGTTTCGATTTTGAATGCTTTTTGGATGTGGGTTTTGTTTGGGGTCTAAGAAAATGGGTGCAAATTCTAGATGCCTATTTACCCCCTCATGCTGCTAAAACCAAACGGACCATAATTTTTGAGGAAGATAAATCTACCAAGACTGAAAAACCACCTTCACCTGTAACTACGGATCAGGCTAATCAGACCAACCAGACCAATATTCATCTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATTCCACCATACTACAACTCAGCTGTGGCTTCTGGTCACACTCCTCACCCTTACATGTGGGGGCCTCCACAGCCTATGATGCCACCTTATGGGCCGCCGTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGGAGTTCCTGTTGGGCCGCATCCACATGGTCAAGGAGTTCCATCTTCACCTGCTACTGGGACGCCTTTAAGTATAGAGACACCACCAAAATCTGGAAATTCTGATCTGGGTTTAATTAAGAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATTGGCAATGGCCATGCTGAGAGTGCAGAGCATGGAGCTGAAAACAAGCTATCCCAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACCGCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGAAAAACTGAGTTACAAGCTAGTCCAGTAACTCCAGTTTCCAAGGAGACTGCAGCTCCTAATAAGACAATGCCAATTGCCCCTACTAGTGTTGCTGGAAAATTAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCGCATTGGAGCTGAGGAGTGTCCATTCTAAAACAAATGCCCTACAGCCAGTATTGCCTCCAGAAGTTTGGATACAGAATGAGCGCGAGCTGAAACGTGAGAGGAGGAAACAATCAAATAGAGAATCTGCTAGAAGGTCCAGACTTAGGAAGCAGGCTGAGTCTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGTGTCGCTGAAATCAGAAATAAATCGATTGACAGACAATTCTGGAAAACTGAGGGTGGAAAATGCTACATTAAGGGAAAAACTCAAAAATGCTCAACTGGGACAAACGGAAGAGATAATGCTGAACAGCATTGACAGCAAGAGGGCTGCACCTGTGAGTACAGAGAACTTGCTATCAAGAGTTAATAATTCCAGTTCCAATGATAGGACTACTGAGGATGAGAATGTTTATTGTGACAACAAATCAAACTCTGGTGCAAAGCTGCATCAACTACTGGATACAAGTCCTAGAGCTGATGCTGTAGCAGCTGGTTAA 1617 0.4607 MSGVAGLDPHNARRVDGFCCDHVYGCGDVGINNLASAISDGPAQQPPHPFRTVYTAYVYATFYIRHVYGKILLLCLSGFRESFDFECFLDVGFVWGLRKWVQILDAYLPPHAAKTKRTIIFEEDKSTKTEKPPSPVTTDQANQTNQTNIHLYPDWAAMQAYYGPRVTIPPYYNSAVASGHTPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPGVPVGPHPHGQGVPSSPATGTPLSIETPPKSGNSDLGLIKKLKGFDGLAMSIGNGHAESAEHGAENKLSQSVDTEGSSDGSDGNTAGANQTRRKRSREGTPTTDGEGKTELQASPVTPVSKETAAPNKTMPIAPTSVAGKLVGPVVSSGMTTALELRSVHSKTNALQPVLPPEVWIQNERELKRERRKQSNRESARRSRLRKQAESEELARKVESLNAENVSLKSEINRLTDNSGKLRVENATLREKLKNAQLGQTEEIMLNSIDSKRAAPVSTENLLSRVNNSSSNDRTTEDENVYCDNKSNSGAKLHQLLDTSPRADAVAAG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3586 538 Pfam Disordered region downstream of MFMR 251 378 - -
Dod01g3586 538 Pfam G-box binding protein MFMR 122 217 IPR012900 -
Dod01g3586 538 Gene3D - 396 450 - -
Dod01g3586 538 PANTHER G-BOX-BINDING FACTOR 3 122 538 - -
Dod01g3586 538 PANTHER G-BOX-BINDING FACTOR 3-RELATED 122 538 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dod01g3586 538 MobiDBLite consensus disorder prediction 215 252 - -
Dod01g3586 538 MobiDBLite consensus disorder prediction 398 419 - -
Dod01g3586 538 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 395 458 IPR004827 GO:0003700|GO:0006355
Dod01g3586 538 SUPERFAMILY Leucine zipper domain 396 451 IPR046347 GO:0003700|GO:0006355
Dod01g3586 538 MobiDBLite consensus disorder prediction 319 338 - -
Dod01g3586 538 MobiDBLite consensus disorder prediction 228 245 - -
Dod01g3586 538 MobiDBLite consensus disorder prediction 278 304 - -
Dod01g3586 538 MobiDBLite consensus disorder prediction 271 349 - -
Dod01g3586 538 CDD bZIP_plant_GBF1 398 445 IPR045314 GO:0003700|GO:0006355
Dod01g3586 538 SMART brlzneu 393 457 IPR004827 GO:0003700|GO:0006355
Dod01g3586 538 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 400 415 IPR004827 GO:0003700|GO:0006355
Dod01g3586 538 MobiDBLite consensus disorder prediction 492 511 - -
Dod01g3586 538 Pfam bZIP transcription factor 393 455 IPR004827 GO:0003700|GO:0006355
Dod01g3586 538 Coils Coil 413 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3586 Dod-Chr1 77236787 77242532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3586 127 538 bZIP Transcription Factor Family AT2G46270 52.506 3.28e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g3586 MFMR_assoc 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3586 K09060 - gmx:778133 624.394