Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3568 ATGACCCTTATAACTGTTCAACTGCACCCGTTTCTAGGGAAATTTTTGGCAGCTCTTGTATCGTTTCAAACTTACGCCGCTTCCCAATCCCAATGGGCTAATTTCTCTTTTGGGCACAAGAGGTTTTCGTTGGACATGAATACAAGAAACCACTCACCTGTGCTCCATTTGTTTTCATTCTTCATGCTTACAATATTCAAAGAGACTCGGGTCGCTCCCTTACTCTTCTCCCCTGCACCTAGCCCACAAGGAGAATGTGACTTGAATTTCACCAGATATTCTTACGTGGCATTTGATGAGTGCGGGGATGTGCAAGAGGACATAGACAAGTGGGGCTGGGATGGGTTCCCAGCCACCGTGTGCTGCCGTAATGCTCTCGCCTATTTGTCCAATGCGATGGCCTTCCAAGCCCGTAACAGGTCAGGAAACCTCTTCATTCCCCAAACTCAATGGCAGGCCTGCACCAACTCGTTCCAACCGCAACATGGGATGTCAGCCCATTCCTGCGGCTTCGACAACTTGTACTCTGCAGGAGCCTCATTCCACTGCACCGCCTTGACTCTTCAGGATGTTCAGGCCATGCCGCAGTACACAGATTCCATGGACCAATGCTCCCACTTCGACCAACCATATGTCCAGTCATGTGCAGACTGCACCACTGCCATATTGACCTTGAGGGATGCTCTGTTTTCAAACATCGGCAATAGTGCTAACAGAGCCATTTGCGGGGTAGCAGCTCTTGTTGCTGTTGCTGCCGGCACACCCGATGACCCTTTCCTCACTGACAAATTCTTACGCTGCTTGCCATATTCCGCGGAAAAATCGAGTAACAGACAATATTCGGCAAGTCCGGTGCTAGTAAGCGTGCCATTAGTTGTGGTTGCTGTGCTGCTGATCGCTCTTGTGGTGAAATATGGGAGCAATAAGAAGAAGAAGCAGCCTCTTGTGCCGGTTCAGTTGACGGATATTACTTCCTGGTCTGGACTTTACTGTTTCACAAAAGCTGAAATCGACAAGGCCATGAATTATGGCGATGAGAGGATATGCCTTGGGCGTGGGAGTGCAGGTCAAGTGTACAGGGGTGTTCTGCCCAGCGGCCAACTTGTGGCCATCAAGCATTTGACAAAGAGCAATACGTCTGATTCCTTCACTCGAGAGGTTCAAGGCCTTTCCAGGCTTCGTCATCCCAATTTGGTTTGCCTGTTTGGCTGTTGCATTGAAGGTGGCGAGAAATATTTGGTCTATGAGTTTTGTGCAAACGGGAATCTTGGTCAACATCTCCTAAGAAAAGGCAGTCATTTGAAATGGGAAACAAGAGTTAGCATTTTGAGGGACTGTTCTTTCGCACTCAAGTATCTCCACCATCATATAGAAGGCTGTGTAGTCCATAGAGATATAAAGCTGACGAACATCCTTCTGACTGAGAAATACCAAGCGAAACTGTCGGATTTTGGGCTGGCAAGGATGATGGGGATGGAGGAGAGCAAGGTTTTCACTGATATTAGAGGAACCATAGGGTACATGGATCCTGAGTACCTGAGTAATGCCAAGCTAACGTGTGCCAGCGACGTATACAGTTTCGGTATTGTTGCTTTACAAATTCTGTCAGGACAGAAAGTCATAGAACTGGATCTTGATGCCAGAGACCAGCTCACCAGGAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCACTGTCGGATTTTGAGGATCCGAGGCTAAATGGAGAAGTTGATAAGGATGACTTTGAGTCCATCTTACACATTGCAGTCCTGTGTGTTGCAAAACAAAGCAAGGGTCGTCCAACCATCGAGGTTGTCTTTGAAGAGTTGGATAAGGTCTATAGGGATACGTGCGCACGGGTATAG 1866 0.4796 MTLITVQLHPFLGKFLAALVSFQTYAASQSQWANFSFGHKRFSLDMNTRNHSPVLHLFSFFMLTIFKETRVAPLLFSPAPSPQGECDLNFTRYSYVAFDECGDVQEDIDKWGWDGFPATVCCRNALAYLSNAMAFQARNRSGNLFIPQTQWQACTNSFQPQHGMSAHSCGFDNLYSAGASFHCTALTLQDVQAMPQYTDSMDQCSHFDQPYVQSCADCTTAILTLRDALFSNIGNSANRAICGVAALVAVAAGTPDDPFLTDKFLRCLPYSAEKSSNRQYSASPVLVSVPLVVVAVLLIALVVKYGSNKKKKQPLVPVQLTDITSWSGLYCFTKAEIDKAMNYGDERICLGRGSAGQVYRGVLPSGQLVAIKHLTKSNTSDSFTREVQGLSRLRHPNLVCLFGCCIEGGEKYLVYEFCANGNLGQHLLRKGSHLKWETRVSILRDCSFALKYLHHHIEGCVVHRDIKLTNILLTEKYQAKLSDFGLARMMGMEESKVFTDIRGTIGYMDPEYLSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLNGEVDKDDFESILHIAVLCVAKQSKGRPTIEVVFEELDKVYRDTCARV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3568 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Dod01g3568 621 Pfam SPARK 82 236 IPR043891 -
Dod01g3568 621 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Dod01g3568 621 SUPERFAMILY Protein kinase-like (PK-like) 325 610 IPR011009 -
Dod01g3568 621 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 98 618 - -
Dod01g3568 621 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3568 621 ProSiteProfiles Protein kinase domain profile. 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3568 621 Gene3D Phosphorylase Kinase; domain 1 317 417 - -
Dod01g3568 621 Pfam Protein kinase domain 350 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3568 621 PANTHER OS01G0253100 PROTEIN 98 618 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3568 Dod-Chr1 77020575 77030753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3568 320 613 Receptor kinase-like Gene Family AT5G66790 38.889 8.56e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Dod01g3568 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3568 - - gmx:100807158 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3568 01 77020575 77030753 Dod07g1986 07 50647037 50651510 PCT