Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3552 ATGGAAAGAGGACTGCCTCTTACCTTGTTCTTGCTCTCGTTGGTTCTCTTCTCTCTTGCGCTCTCTGCTTGTGCCATAGATGTTGAGTTTGGGCACTGCAACTGTGATGATGAGGAAGGTCTTTGGACCATTCAGAGCATCCTTGTTTGCCAAAAAGTCAGTGATTTCTTCATTGCCATTGCATACTTTTCCATTCCCGTTGAGCTTCTTTACTTTATTAGCTACTCCAATGTCCCATTCAAGCTGGTCTTCCTTCAGTTCATTGCCTTCATAGTCCTCTGTGGGTTGACCCATTTGCTCAATGCGTACACCTATTATGGGCCTCACTCCTTCCAGTTGTTGCTCTCTCTCACAGTTGCTAAGTTCCTCACTGCCCTTGTCTCCTGTGCAACTGCGATCACCTTCCCAACCCTCATCCCCCTTCTCCTCAAGATCAAAGTTAGGGAACTTTTCTTGAGGCAGAGTGTGTTGGATTTAGGCCAGGAAGTTGGGATGATGAAGAAACAGGAGGAAGCAAGCTGGCATGTTAGGATGCTCACCCGCGAAATCAGGAAGTCTTTGGATAAGCACACCATATTGTATTCCACACTTGTTGAGCTCTCAAAGGCCTTGGATTTGCATAATTGTGCAGTATGGATGCCTGATGAGGACAGGCGAGAAATGCATTTGACTCATGAGTTGAAGCAAAGCTCAGCAAATAATTACCATAATTCTATTCCTATCGATGATTCAGATGTATTAGAGATAAGAAAGAATAAGGGTGTGAGGATTTTGGGGCCTAATTCTGCTTTAGGAGCTGCGACTTGTGGTGAATCTGGGGAGTCAGGTGCAATAGCAGCTATTCGAATGCCGATACTTCATGTTTCGAATTTCAAAGGAGGGACTCCGGAGATGGTAGAGACATCATATGCTATACTGGTTTTGGTTCTTCCAACTTCAAGCTCCAGGGCTTGGACCTCCCATGAAATGGAGATAGTGGGAGTGGTTGCTGACCAGGTGGCTGTGGCCTTGTCTCATGCATCCGTGCTTGAAGAATCCCAGCTGATGAGACAGAAACTTGCAGAGCAGAACCGGGCATTGCAACAGGCTCAAAAGAGTGCAATGATGGCCAGCCAGGCAAGGAGCTCATTTCAGAAAGTGATGAGTCATGGAATGAGGAGACCTATGCATACGATCATGGGCTTGCTTTCGATGCTTCAAGAGGACAATATGAGATCTGAACAGAAGATTATTATTGACACAATGCTGAAAGTTAGCAATGCCCTCTCGAGTTTGATTAATGATGTGATGGAGATTTCGGCAAATGACAAAGGAAGTTTCCGGTTAGAGATGAAACCTTTCCATTTGCATTCCATGCTGAGGGAAGCTTCTTGTATTGCCAAGTGCCTGTGTGTATATAAACGCTTTGGTCTTGAGATTGATGTCCACAAGGCTTTACCGGATCTGGTCATGGGTGATGAGGCAAGGTCTTTTCAAGTAATTCTGCACTTGATAGGTTATTTATTGAACAAGTATGACAGAGGGACTCTCATTTTTCGAGTATTTCTTGAAACTGATAGTGGAGATAAGGATGATAAAGGTTTTGGGATATGGAGATCGAGTGTGCAAAATGATTATATATATATTAAATTTAGTTTTCAGATAAAGGGTGCTAGTTCCCAGTTAGATGAATTAAGTTCAACAAGACATTATGCTGGTAGAAGGCACTACAACAATGAACCTAATGAAGACCTGAGCTTCAGCATGTTCAAAACGCTGGTGCAGATGATGCAAGGTAATATCGGGACATCACCAAACTCTTCGGGTTTGGTGCAAGGCATAACACTTCTTCTCAGGTTTCAAGAGGGTCGACCATCATTTGGAAGATCCATTTTTGCGCCTAAAGAATTTCCAAACCCACAGTTTAGAGGCTTTAAGGTTGTGTTAGCGGACGATGATGATGTAAACAGGACAGTGACCAAGAAGCTGCTTGAGAAGCTGGGTTGTCAAGTAACTGCCGTTTCGTCAGGGTTCGAGTGCCTGAGCGCAATAAGTGCCGCCGGTAACACATTCAGGATCATCCTGTTGGATCTTCACATGCCTGAAATGGATGGCTTCGAAGTGGCGAGAAGGATCCGGAAGTTCCACAGCCGAAATTGGCCCTTGATTATAGCTCTTACAGCGAGTGCAGAAGAGCATGTGAGGGAGAAATGCATACAGGTGGGAATGCAAGGATTGATTCGGAAACCTATCCTCCTTCATGAGATTGCTGATGAACTTAGAACAGTCTTGCAACGTGCAGGTGAAAAATTATGA 2295 0.4449 MERGLPLTLFLLSLVLFSLALSACAIDVEFGHCNCDDEEGLWTIQSILVCQKVSDFFIAIAYFSIPVELLYFISYSNVPFKLVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLLLSLTVAKFLTALVSCATAITFPTLIPLLLKIKVRELFLRQSVLDLGQEVGMMKKQEEASWHVRMLTREIRKSLDKHTILYSTLVELSKALDLHNCAVWMPDEDRREMHLTHELKQSSANNYHNSIPIDDSDVLEIRKNKGVRILGPNSALGAATCGESGESGAIAAIRMPILHVSNFKGGTPEMVETSYAILVLVLPTSSSRAWTSHEMEIVGVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQKSAMMASQARSSFQKVMSHGMRRPMHTIMGLLSMLQEDNMRSEQKIIIDTMLKVSNALSSLINDVMEISANDKGSFRLEMKPFHLHSMLREASCIAKCLCVYKRFGLEIDVHKALPDLVMGDEARSFQVILHLIGYLLNKYDRGTLIFRVFLETDSGDKDDKGFGIWRSSVQNDYIYIKFSFQIKGASSQLDELSSTRHYAGRRHYNNEPNEDLSFSMFKTLVQMMQGNIGTSPNSSGLVQGITLLLRFQEGRPSFGRSIFAPKEFPNPQFRGFKVVLADDDDVNRTVTKKLLEKLGCQVTAVSSGFECLSAISAAGNTFRIILLDLHMPEMDGFEVARRIRKFHSRNWPLIIALTASAEEHVREKCIQVGMQGLIRKPILLHEIADELRTVLQRAGEKL* 765
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3552 764 CDD REC_ETR-like 639 753 - -
Dod01g3552 764 ProSiteProfiles Response regulatory domain profile. 639 757 IPR001789 GO:0000160
Dod01g3552 764 Gene3D - 339 436 - -
Dod01g3552 764 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155|GO:0007165
Dod01g3552 764 SUPERFAMILY CheY-like 634 759 IPR011006 -
Dod01g3552 764 SMART REC_2 638 753 IPR001789 GO:0000160
Dod01g3552 764 Gene3D - 165 338 IPR029016 -
Dod01g3552 764 PANTHER ETHYLENE RECEPTOR 10 757 - -
Dod01g3552 764 SMART gaf_1 188 347 IPR003018 GO:0005515
Dod01g3552 764 CDD HATPase_ETR2_ERS2-EIN4-like 479 611 - -
Dod01g3552 764 PIRSF Ethylen_sen_hybr_HK 6 764 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Dod01g3552 764 Pfam Response regulator receiver domain 640 752 IPR001789 GO:0000160
Dod01g3552 764 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 358 438 IPR036097 GO:0000155|GO:0007165
Dod01g3552 764 SMART HisKA_10 373 438 IPR003661 GO:0000155|GO:0007165
Dod01g3552 764 Pfam GAF domain 190 337 IPR003018 GO:0005515
Dod01g3552 764 Gene3D - 639 763 - -
Dod01g3552 764 SUPERFAMILY GAF domain-like 191 340 - -
Dod01g3552 764 Coils Coil 343 366 - -
Dod01g3552 764 Gene3D - 437 615 IPR036890 -
Dod01g3552 764 ProSiteProfiles Histidine kinase domain profile. 380 617 IPR005467 -
Dod01g3552 764 PANTHER TWO-COMPONENT HISTIDINE KINASE 10 757 - -
Dod01g3552 764 CDD HisKA 371 433 IPR003661 GO:0000155|GO:0007165
Dod01g3552 764 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod01g3552 Dod-Chr1 76773096 76778328 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3552 27 762 Miscellaneous Gene Families AT3G04580 61.148 0.0 894
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g3552 GAF 3.9e-11 CL0161
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3552 K14509 - gmx:100805023 1194.1
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3552 01 76773096 76778328 Dod01g3552 01 76773096 76778328 ECH