Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3551 ATGGCGAACCGGTGGTGGACCGACCCGGTGGGTCTCGCCGGGGTTGAGAACGCCACCAACAACTCCTCCCCCATGAAGAAACCGGATCTGGGTTTCTCCATGAACAGCGAATCTGCACCCATGGCTACCGCGAGCAGAGACGAAGAAGCAGTAGACAAAGAGAACAACAGCAGCGAGGACCCCAAGGAAGGAGCTGTGGAGGTGTCCGCCACGCGCCGCCCGAGGGGGCGGCCGACGGGATCCAAGAACAAGCCGAAACCACCGATATTCGTGACGAGAGACAGCCCTAACGCGCTCCGAAGCCACGTCATGGAGGTTGCAAACGGTGCTGACATCGCCGATAGCTTGGTTCAATTCGCGAGGAAGCGCCAGAGAGGGGTGTGCGTCCTCAGCGCCACAGGAACCGTCGCCAACGTCACGCTCCGGCAGCCGACAGCGCCCGGAGCGGTCATGGCGCTGCACGGCCGCTTTGAGATCATATCTTTGACGGGCTCGTTTCTGCCGGGGCCGTCGCCGCCGGGGTCAACGGGTCTGACGGTTTATCTCGCCGGCGGGCAGGGGCAGGTTGTGGGCGGAGCGGTGGTGGGCCCCCTGGTGGCGTCGGGAGCGGTTATGATAATGGCGGCTACGTTTTCCAATGCAGTGTATGAGAGGTTGCCCATTGAGGAGGATGAGGATCAAGAAGTGCAGGGGCAAGTAAGTGGTGGCGGTGGTGGGTCTCCCCCGGGGTTCCGTGGTGGTGGAGGACAGCAGGCGGGTGGTGGGTCCGGCGCCGGGGAGGGTTCATCGGCGGCGGTGTATAATATTGGTCATCAGAATTTGGGCGGGCAGCAGTTGAGCCATGAAGCTTACAATAATTCTGCAGCTTGGGGGCATGCGCGGCCACCCTATTGA 894 0.6219 MANRWWTDPVGLAGVENATNNSSPMKKPDLGFSMNSESAPMATASRDEEAVDKENNSSEDPKEGAVEVSATRRPRGRPTGSKNKPKPPIFVTRDSPNALRSHVMEVANGADIADSLVQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPPGSTGLTVYLAGGQGQVVGGAVVGPLVASGAVMIMAATFSNAVYERLPIEEDEDQEVQGQVSGGGGGSPPGFRGGGGQQAGGGSGAGEGSSAAVYNIGHQNLGGQQLSHEAYNNSAAWGHARPPY* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3551 297 MobiDBLite consensus disorder prediction 14 29 - -
Dod01g3551 297 MobiDBLite consensus disorder prediction 1 94 - -
Dod01g3551 297 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Dod01g3551 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 297 - -
Dod01g3551 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 297 IPR014476 GO:0003680
Dod01g3551 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Dod01g3551 297 MobiDBLite consensus disorder prediction 225 264 - -
Dod01g3551 297 MobiDBLite consensus disorder prediction 46 70 - -
Dod01g3551 297 Gene3D - 99 231 - -
Dod01g3551 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 225 - -
Dod01g3551 297 CDD DUF296 100 182 IPR005175 -
Dod01g3551 297 PIRSF ESCAROLA 13 297 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3551 Dod-Chr1 76752227 76753942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3551 1 297 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.169 1.16e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3551 - - aprc:113863548 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3551 01 76752227 76753942 Dod01g3551 01 76752227 76753942 ECH