Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3541 ATGTGCGAAGCTCTGAAGAAGAATCAGTATGAGTTGCTAGAGGAGATCGGACGAGGGAGGTTCGGCACGGTGTACCGGTGCTCCGATCCCACCTCCGACGACGACTTCTACGCTTGCAAGGTCATCGACAAGCGCGTCCTCTCAGACGCCACGGACCGCGCCTGCATTGAAAACGAGTCCAAGTTCATGACCTTCCTCTCCCCTCACCCAAACATCCTTCGAATCTTTGCCGCATTCGAGGATTCCGATTCTCTCTCCATCGTCACCGAGCTCTGCGAGCCCACCTCCCTCTTCGATCGCATCGCCGATGGCCCCTTGCCGGAGCCAGAAGCCGCCTCCCTCATGAGGAACCTTCTAGATGCTTTGGCGCATTGCCACAGGCTTGGGATTGCGCACAGGGACATAAAACCCGACAACCTGCTGTTCGATCCGAGGGGGAACCTTAAACTCGCGGATTTCGGTTCGGCGGAGTGGTTCGGTGACGGGAGGGGGATGAGTGGGGTGGTCGGGACGCCGTATTACGTGGCGCCGGAGGTGCTGATCGCGAATGAGTACGGGGAGAGGGTTGATGTTTGGAGCTGCGGTGTGATCATGTACATAATGTTGGGTGGGATTCCTCCGTTTTATGGAGAGGATGCTTCTGAGATTTTCGAGGCTGTTGTTAGGGCTAATCTTAGGTTTCCAACGAAGATTTTTAGGGCTGTGTCGTCTCCTGCTAAGGATCTCCTCAGGAAGATGATTTGCAAGGATCCATCCAGGAGAATATCTGCAGAGCAAGCCCTGAGGCATCCATGGATCTTGAGTGGAGGGGTGACTGGTCATCTTCCTTGA 831 0.5523 MCEALKKNQYELLEEIGRGRFGTVYRCSDPTSDDDFYACKVIDKRVLSDATDRACIENESKFMTFLSPHPNILRIFAAFEDSDSLSIVTELCEPTSLFDRIADGPLPEPEAASLMRNLLDALAHCHRLGIAHRDIKPDNLLFDPRGNLKLADFGSAEWFGDGRGMSGVVGTPYYVAPEVLIANEYGERVDVWSCGVIMYIMLGGIPPFYGEDASEIFEAVVRANLRFPTKIFRAVSSPAKDLLRKMICKDPSRRISAEQALRHPWILSGGVTGHLP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3541 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 272 - -
Dod01g3541 276 SUPERFAMILY Protein kinase-like (PK-like) 8 268 IPR011009 -
Dod01g3541 276 SMART serkin_6 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3541 276 Gene3D Transferase(Phosphotransferase) domain 1 3 272 - -
Dod01g3541 276 Pfam Protein kinase domain 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3541 276 ProSitePatterns Protein kinases ATP-binding region signature. 16 40 IPR017441 GO:0005524
Dod01g3541 276 CDD STKc_CAMK 9 265 - -
Dod01g3541 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Dod01g3541 276 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 272 - -
Dod01g3541 276 ProSiteProfiles Protein kinase domain profile. 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3541 Dod-Chr1 76663490 76664983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3541 10 269 EF-hand Containing Proteins AT4G04720 43.182 7.93e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod01g3541 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3541 - K08794 gmx:548089 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3541 01 76663490 76664983 Dod01g3541 01 76663490 76664983 ECH