Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3535 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGGAAGAACCAATGGGCTCGAATCTCTTCCCTCCTCGTCCGCAAATCTGCCAAGCAATGCAAGGCTCGCTGGTATGAGTGGCTCGACCCTTCCATTAAAAAGACTGAGTGGACTAGGGAAGAGGATGAGAAATTGCTTCACCTTGCTAAGCTTATGCCCACACAGTGGAGAACTATTGCTCCCATTGTGGGTCGTACCCCTTCCCAGTGCCTTGAGCGCTATGAGAAACTCCTTGATGCTGCCTGTGTTAAGGATGACACCTATGAGCCTGGCGATGACCCCCGAAAATTGCGCCCTGGGGAGATTGATCCCAACCCTGAGTCCAAGCCTGCTAGGCCTGATCCTGTTGACATGGATGAGGATGAGAAGGAGATGCTTTCCGAGGCACGAGCTCGGTTAGCCAACACCAAAGGCAAGAAGGCTAAAAGGAAAGCCAGGGAGAAGCAGCTCGAGGAAGCCAGGAGGCTTGCTTCTTTGCAGAAAAAGAGGGAGCTGAAGGCTGCTGGAATTGATATCAGGCAGCGCAGGAGGAAGCGGAAAGGAATAGACTATAATGCAGAGATTCCCTTTGAGAAGAGGCCTCCTCCGGGGTTCTTTGATGTTACTGATGAGGATAGGCCGGTGGAACAGCCCAAGTTCCCTACTGCAATTGAAGAACTTGAGGGAAAAAGAAGGGCTGATATCGAAGCACAGTTGAGAAAGCATGACATTGCAAAGAATAAAATTGCAGAGAGGCAGGATGCCCCATCTGCTATTCTGCATGCCAACAAGCTGAATGACCCTGAAACTGTTAGAAGGAGGTCAAAGCTGATGCTTCCACCACCCCAGATTTCTGACCACGAATTGGATGAGATTGCAAAGTTGGGTTATGCCAGTGACCTTGCAGGGAGTGAGGAATTTGCAGAAGGTAGTAGTGCTACACGTGCTCTTCTGGCGAATTATGCACAGACACCCAACCAAGGAATGACTCCTTTGAGAACTCCCCAGCGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCGGACACCATTACTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCAGACTCCAAATCCAATGCTGACTCCCTCTGCTACTCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACTCCAGTAAGGGATGGTTTTGCTTACGGCATGACTCCAAAGGGAACTCCTCTGAGGGATGAGCTACATATTAATGAGGACATGGATATGCATGAAAGTGCAAAACTTGAGCTACGGAGACAAGCTGATCTGAGAAGAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCAACCAGTTTCAGAAGATGCTGAGGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCCAGAGAAAAGGCGGAAGAAGATGCAAGGCAGCAGGCTTTACTAAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAGAAATTCCCTGATGAGAGCTGATGAGGACAAGAGTTCCTTCGTCCCACGCACCTCTATTGAACAAGCTGACGAGATGATAAGAAAGGAGCTTCTAACCTTACTGGAGCATGACAATGCAAAATATCCACTTGATGAGTTAGTGAATAAGGAGAAAAAGAAAGGAACCAAACGTGCTGCAAATGGGCTCGTTGTCCCTGTGATAGAAGATTTTGAAGAAGATGAGATGAAAAATGCTGATCAGTTGATAAAGGAGGAGGCACAATACCTTAGTGTGGCAATGGGGCATGAAAGTGAATCCCTTGATGAATTTGTCGAAGCACATTCAACTTGCATTAATGATCTTATGTACTTTGCCACTCGTAATGCCTATGGTCTATCAAGCGTTGCTGGAAACATGGAGAAGTTAGCGGCTTTGCAGAATGAATTTGACAATGTGAAAAGCAAGTTGGATGATGGTAAAGAGAAGGCAGCACGGCTTGAGAAGAAGGTGACGGTACTCACACAAGGCTATGAGATGAGGGCAAAAAAAGGTCTTTGGCCACAAATTGAAGCTACTTTCAAGCAGATGGACATAGCTGCAACAGAATTGGAGTGCTTCCAAGCTTTACAAAAGCAGGAGCAATTAGCAGCATCACACAGGATAAACAATCTATGGACTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTTTACAACAGAGGTATGGGGATCTTATAGCAGAGCTGGAAAGGATACAAATTGTAATGGAACAGTACAGGGTACAAGCACAACAGCAAGAAGAAATTGAAGCAAGGAATCGTGAGTTTGAATCTACTGAGACTGCAGCTGATGAAATTAATGTTCAGGGTACAGAGAATTGTAATGCTGTACCCCACTCAGTTGACCATGGAAGTGCTATATCAGTGGATTCACCTCATGTTGGAACTGCTGACCAACCAGCAGACATTGCACCTGACCAGGCCACTTCTATCTCCAAAAATGATATGGATATGGATTGTCGTGAAGAGCTAATGAAACAGGACACTGATACCAAATGGCCAGATGCACCTGCTGCAGAGGACAACGGCCCCATAGTGGTAGAAGGTAACAACACTGGAGCTTGCATTGAGAACAGAGAGGCCACACCAGACAATAGTACTTCAGTGGAAGTAAGTAGTATTGAGGGAAATAGTGAGAAGCTACATATTGACAATCCAGATAAGATGGAAGGTGTAAACCAATGTGATAGCAGCATACAAGAAACCATTCCACTTGATGAGGAAGATAAGATGGAAGTTGCGGGAGGCAGAGGAGAGGTGGTAAATTAG 2970 0.4606 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDTYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTAIEELEGKRRADIEAQLRKHDIAKNKIAERQDAPSAILHANKLNDPETVRRRSKLMLPPPQISDHELDEIAKLGYASDLAGSEEFAEGSSATRALLANYAQTPNQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESRTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGSAGLTPRSGMTPVRDGFAYGMTPKGTPLRDELHINEDMDMHESAKLELRRQADLRRSLRSGLSSLPQPKNEYQIVMQPVSEDAEEPEEKIEEDMSDRMAREKAEEDARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADEDKSSFVPRTSIEQADEMIRKELLTLLEHDNAKYPLDELVNKEKKKGTKRAANGLVVPVIEDFEEDEMKNADQLIKEEAQYLSVAMGHESESLDEFVEAHSTCINDLMYFATRNAYGLSSVAGNMEKLAALQNEFDNVKSKLDDGKEKAARLEKKVTVLTQGYEMRAKKGLWPQIEATFKQMDIAATELECFQALQKQEQLAASHRINNLWTEVQKQKELEKTLQQRYGDLIAELERIQIVMEQYRVQAQQQEEIEARNREFESTETAADEINVQGTENCNAVPHSVDHGSAISVDSPHVGTADQPADIAPDQATSISKNDMDMDCREELMKQDTDTKWPDAPAAEDNGPIVVEGNNTGACIENREATPDNSTSVEVSSIEGNSEKLHIDNPDKMEGVNQCDSSIQETIPLDEEDKMEVAGGRGEVVN* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3535 989 CDD SANT_CDC5_II 55 106 - -
Dod01g3535 989 MobiDBLite consensus disorder prediction 399 423 - -
Dod01g3535 989 MobiDBLite consensus disorder prediction 157 176 - -
Dod01g3535 989 MobiDBLite consensus disorder prediction 925 946 - -
Dod01g3535 989 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Dod01g3535 989 Gene3D - 57 113 - -
Dod01g3535 989 Gene3D - 5 56 - -
Dod01g3535 989 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Dod01g3535 989 Coils Coil 796 816 - -
Dod01g3535 989 PANTHER - 1 903 - -
Dod01g3535 989 SUPERFAMILY Homeodomain-like 5 50 IPR009057 -
Dod01g3535 989 MobiDBLite consensus disorder prediction 925 960 - -
Dod01g3535 989 Coils Coil 167 187 - -
Dod01g3535 989 MobiDBLite consensus disorder prediction 380 442 - -
Dod01g3535 989 Pfam Myb-like DNA-binding domain 10 70 - -
Dod01g3535 989 SMART sant 58 105 IPR001005 -
Dod01g3535 989 SMART sant 6 55 IPR001005 -
Dod01g3535 989 MobiDBLite consensus disorder prediction 110 150 - -
Dod01g3535 989 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 903 - -
Dod01g3535 989 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Dod01g3535 989 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Dod01g3535 989 Coils Coil 689 716 - -
Dod01g3535 989 SUPERFAMILY Homeodomain-like 37 107 IPR009057 -
Dod01g3535 989 CDD SANT 10 53 IPR001005 -
Dod01g3535 989 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3535 Dod-Chr1 76582800 76589810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3535 1 817 MYB-Related Transcription Factor Family AT1G09770 76.005 0.0 1225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod01g3535 Myb_Cef 2.6e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3535 K12860 - gmx:100801352 1507.27