Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3513 ATGGGGACTCCAGTGAATATCATTGCGGGGTCTCACGTCTGGGTTGAAGATCCAGACGTATCTTGGATTGATGGAGAGGTATCGAAAATCACTGGGAACGATGCTGAAATTCAGACAACCGATGGAAAGAAGGTTGTCGCAAAGTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCTGGCGGGGTGGATGATATGACTAAGCTCTCCTACTTGCATGAGCCTGGAGTCCTGGAGAACTTAAAAAGTAGATATGAATTGAATGAAATATATACATATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGATTACCTCATATTTATGATGCACACATGATGCAACAATACAAGGGAGCACCATTTGGAGAACTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATACAGGGCAATGGTTAACGAAGGAAAGAGCAATTCAATTCTGGTCAGCGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCGATACCTCGCATTCTTAGGTGGTAGGGCTGCCACTGAAGGACGAACAGTGGAACAACAAGTTCTTGAATCAAATCCAGTTCTAGAAGCATTTGGCAATGCTAAAACTGTCCGAAATAACAATTCCAGTCGATTTGGTAAATTTGTTGAGATTCAATTCGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCCCGGGTTTGCCAAGTAAATGATCCTGAACGCAATTACCACTGCTTTTATCTTCTTTGTGCTGCGCCACAAGAGGAAGTTGAGAAATACAAATTAGGAAATCCTAAAACATTTCACTACCTTAACCAGTCAAAATGCTTTGAGCTAGCTGACGTAAGTGATGCTCATGAGTATCTCGCCACTAGGAGAGCTATGGATATTGTTGGAATAAGCCAGAAAGAGCAGGAAGCAATTTTCAGAGTAGTTGCTGCAATTCTTCATATTGGTAATATTGATTTTGCCAAAGGAAAGGAAGTCGATTCATCAATTCCAAAAGACGACAAATCAAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATGTGTGATGCTGATGCCTTGGAAGATGCATTAGTCAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCATTAGTCAGCAGAGATGGCTTGGCAAAAACAATATATTCTAGGCTCTTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGGCAAGATGCCAATTCAAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACCAACAGCTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAAATCGATTGGAGTTACATTGAATTTGTTGACAACCAGGATGTTTTGGACCTTCTTGAAAAGAAACCTGGTGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACGCATGAAACATTTTCAAACAAGCTGTATCAAACATTCAAGAATCACAAACGCTTCATTAAGCCAAAATTGTCTAGAACAGATTTCACTATTTCTCATTATGCCGGCGAGGTGCAATATCAGTCTGATCAGTTTTTAGACAAAAACAAGGATTATGTTGTTCCTGAACATCAAGATTTATTGAGTGCTTCCAAATGTCCTTTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAGGAGACATCAAAATCTTCAAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTTCAACTACAGCAACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAGTTTTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGCTGTGCTGGCTACCCTACTCGTCGTCCATTTTTTGAATTTATCAACCGATTTAACCTCCTTGCTCCAGAGATCACGGAAGCACAAAATGATGAGAAGGCTGTTTGCCATAAAATTCTAGAAAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAATTAGATGCACGGAGAGCTCAGGTGCTTGGTAATGCAGCGAAAACTATCCAAATGCGTGTACGAACCCATCAAGCTCGTAAACATTATCTTGCATTGCGGAAGAAGACCATATACGTGCAGTCTTTGTGGAGAGGAAGACTTGCATGCAAACTTTATGAGAACATGAGAAGGGAGGCAGGTGCTGTGAAAATTCAGAAGAACGTCCGCAGACATGAAGCAAGGAAAGCCTATACTAAACTCCATGCATCAGTACTTACACTGCAAACAGCTTTGAGGGCAGTGGCTGCCCGGAAAGAGTTCAAGTTTAGGAAACAAAGTAAAGCTTCTGTCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTAAATATCACAAAAGGCTCAAGAAAGGTGCAGTAGCCGCACAATGCCGATGGAGGGGGCGTGCAGCGAGGAAGGAGCTCAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCAAAGGACAAGCTTGAAAAGAGGGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGAAGAATCCAAAGCACAGGAGATGGCAAAACTGCAGAATTCATTGCAGGAGATGCAGAAGCAAAGTTGATGAAACTAATGCTATGCTTGCCAAGGAGCGAGAGAATGTAAAGAAAGTTGTTGAAGAAGCACCTCCCGTTATTAAAGAAACTCAGGTTATTGTTGAAGACACTGAGAAGATTGACTCACTAACAGCGGAAGTTGAGAGCCTAAAGACTTCCCTTGATTCGGAAAAACATAAAGCTGATGAATTTGAAAAGAAATACAATGAAGCCCAAGCTTATAGTGAAGAAAAGAATAAAACTTTAGAAGACACAGAGAAGAAGGTTCGTCAGCTTCAAGAATCACTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTCTCAGGCCGCTCCAGATCAATTATGCAGAGAGTTGAGAGTGGGCATATTGCAGCGGAAGCAAAGCCATCTTTGGATATGCATAGCCCATCAATGAACCACAGGGAATCCTCTGAAGTGGAGGATAAACCACAGAAGTCACTGAATGAGAAACAGCAGGAGAACCAAGAGTTGCTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAATAGACCAATTGCTGCCTGTATCATATACAAATGCCTATTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGCGTTTTTGATCGTATAATCCAAACTATTGGCCATGCAATTGAGACACAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTGCAGCAGACACTTAAGGCAAGTGGTGCTGCTGGAATGGCGCCTCAACGTCGTCGTTCTTCATCAGCAACCCTATTTGGGAGGATGACACAAAGTTTCCGTGGTGCTCCGGCGGGAGCCAACCTTTCCCTAATCAATGGCAGCATGCATGGTGGAGTGGATTCATTAAGACAAGTTGAGGCCAAGTACCCAGCATTGCTTTTCAAGCAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTAGAGATAATTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATACAGGCACCAAGAACATCCAGAGCGAGCTTGGTCAAGGGATCATCACGTTCAGTTGCAAACACTGAAGCCCAGAAAGCTTTGATTGCTCACTGGCAAGGGATAGTTAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGCAAGGTGTTCACACAGATTTTCTCTTTCATCAATGTCCAGCTCTTCAATAGCCTTCTTTTAAGACGGGAGTGCTGTTCATTTAGTAATGGAGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAAGCAACAGATGAGTATGCGGGTTCAGCTTGGGATGAGCTCAAACATATAAGACAAGCTATTGGATTTTTGGTAATACATCAGAAACCAAAGAAAACGCTGGATGAGATAAGTCATGACCTATGCCCAGTCCTCAGTATACAGCAGCTATACCGTATAAGCACCATGTACTGGGATGACAAGTATGGCACACACAGTGTGTCCCCTGATGTAATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTCAGTAACTCTTTCCTCATTCCGTTTTCTGTTGATGACATAGCAAAGTCAATGGAACAGATAGACATATCAGATATAGAGCCCCCACCATTAATTCGTGAGAACTCTGGCTTTAGTTTCTTGCTGCCACTTTCAGATTGA 4563 0.416 MGTPVNIIAGSHVWVEDPDVSWIDGEVSKITGNDAEIQTTDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLENLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEVEKYKLGNPKTFHYLNQSKCFELADVSDAHEYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFAKGKEVDSSIPKDDKSKFHLKTTAELLMCDADALEDALVKRVMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINNSIGQDANSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLLEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFNLLAPEITEAQNDEKAVCHKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLGNAAKTIQMRVRTHQARKHYLALRKKTIYVQSLWRGRLACKLYENMRREAGAVKIQKNVRRHEARKAYTKLHASVLTLQTALRAVAARKEFKFRKQSKASVIIQARWRCHKAAKYHKRLKKGAVAAQCRWRGRAARKELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRKNPKHRRWQNCRIHCRRCRSKVDETNAMLAKERENVKKVVEEAPPVIKETQVIVEDTEKIDSLTAEVESLKTSLDSEKHKADEFEKKYNEAQAYSEEKNKTLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIMQRVESGHIAAEAKPSLDMHSPSMNHRESSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQQTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGANLSLINGSMHGGVDSLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLIPFSVDDIAKSMEQIDISDIEPPPLIRENSGFSFLLPLSD* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Dod01g3513 1520 Coils Coil 934 954 - -
Dod01g3513 1520 Pfam DIL domain 1345 1448 IPR002710 -
Dod01g3513 1520 CDD MYSc_Myo11 76 720 IPR036018 -
Dod01g3513 1520 SMART iq_5 734 756 IPR000048 GO:0005515
Dod01g3513 1520 SMART iq_5 782 804 IPR000048 GO:0005515
Dod01g3513 1520 SMART iq_5 853 875 IPR000048 GO:0005515
Dod01g3513 1520 SMART iq_5 830 852 IPR000048 GO:0005515
Dod01g3513 1520 SMART iq_5 805 827 IPR000048 GO:0005515
Dod01g3513 1520 SMART iq_5 757 779 IPR000048 GO:0005515
Dod01g3513 1520 PANTHER MYOSIN 6 1517 - -
Dod01g3513 1520 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Dod01g3513 1520 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Dod01g3513 1520 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Dod01g3513 1520 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 MobiDBLite consensus disorder prediction 1076 1108 - -
Dod01g3513 1520 MobiDBLite consensus disorder prediction 1089 1107 - -
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Dod01g3513 1520 PANTHER MYOSIN-9 6 1517 - -
Dod01g3513 1520 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Dod01g3513 1520 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 Gene3D - 252 310 - -
Dod01g3513 1520 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 883 IPR027417 -
Dod01g3513 1520 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 Gene3D - 439 623 - -
Dod01g3513 1520 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod01g3513 1520 Gene3D - 833 882 - -
Dod01g3513 1520 Gene3D - 786 832 - -
Dod01g3513 1520 Gene3D - 735 785 - -
Dod01g3513 1520 Coils Coil 877 911 - -
Dod01g3513 1520 SMART DIL_2 1344 1451 IPR002710 -
Dod01g3513 1520 Coils Coil 965 1048 - -
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 737 762 IPR000048 GO:0005515
Dod01g3513 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Dod01g3513 1520 Gene3D - 667 733 - -
Dod01g3513 1520 Gene3D Kinesin motor domain 65 662 IPR036961 -
Dod01g3513 1520 ProSiteProfiles Dilute domain profile. 1156 1469 IPR002710 -
Dod01g3513 1520 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Dod01g3513 1520 CDD MyosinXI_CBD 1107 1486 IPR037975 GO:0007015
Dod01g3513 1520 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3513 Dod-Chr1 76384267 76394605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3513 1 1520 Myosins gene family AT1G54560 82.484 0.0 2666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3513 K10357 - gmx:100816792 2686.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3513 01 76384267 76394605 Dod01g3513 01 76384267 76394605 ECH
Dod01g3513 01 76384267 76394605 Dod06g1647 06 22355717 22375650 PCT