Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3502 ATGGCTCCCGATGCTTCCGACGCTCTTGCAGTGAGGCAGAAGGTTCAGTTATTTCTCAACGCTGCTCGTACTGGCAATCTTGATCTCCTCAAGAATTTGGCGAGGCAGCTCGATGAGGGCAAGGATTTAGCGAAAACAGTGGATTCAATCAAGGATGCAAACAAGCGAGGAGCGCTGCATTTTGCTGCCCGTGAAGGCCAGACCGCGGTTTGCAAGTACTTGTTGGAGGAGTTGAAGCTCCATGTCGATTCCAAAGATGATGATGGGGAGACTGCCCTGATTCATGCTGCCCGTCAGGGACACACTGCTACTGCTAAATATCTCGTTGACTGTGGTGCTAATCCTACCATAGCTAGCAACTTAGGGGCTACTGCCTTGCACCATTCTGCAGGGATAGGCGATACTGAGCTGCTCAAGCATTTGCTTTCTAGAGGAGTTAATCCGGATTTAGAAAGTGATGCAGGAACACCTTTGGTTTGGGCTGCTGGTCATGGCCAACAAGCTGCTGTCAGTGTGCTACTAGAGCACGGTGCAAATCCTAATGCTGAAACTGATGATGGTATTACCCCACTCCTTTCATCTGTGGCAGCCAGTTCCCTGGCATGCTTAGAGCTGCTAATTCAGGCAGGTGCTAAAGTAAATATTAGTGCTGGTGGAGCAACTCCTTTGCACATTGCAGCTGATAATGGAAGTCTGGAACTTATAAATTGCTTATTGAAAGCTGGCGCTGATCCTAATGTCTCTGATGAGGATGGTGTTAAGCCAATACAGGTTGCAGCTGCAAGGGGCAATCGTGGAGTTGTTGAGATATTGTTCCCCTTGACATCCAAAATTGACTCTCTTCCTACTTGGACTGTTGATGGGATAATTGAGTATATGCAGTCTGAAACTAAAAAGCAACAGGATGAATCAGTAAATGCCAAAGACACCAGTCAGCCCAAGGATACTGTTTCTCAGAAGCAAAATGTCCCTGAGGTGGCACCTGAAGTCAAAAAGAGAGCAGCAGAAGCAAAATCAAGAGGGAGTGAGGCCTTTGAAAGGAAAGACTATAATATGGCAATAGATTCTTACACACAAGTAAACTCGCCTGATCTCTTATTTGACTCTTGA 1110 0.4667 MAPDASDALAVRQKVQLFLNAARTGNLDLLKNLARQLDEGKDLAKTVDSIKDANKRGALHFAAREGQTAVCKYLLEELKLHVDSKDDDGETALIHAARQGHTATAKYLVDCGANPTIASNLGATALHHSAGIGDTELLKHLLSRGVNPDLESDAGTPLVWAAGHGQQAAVSVLLEHGANPNAETDDGITPLLSSVAASSLACLELLIQAGAKVNISAGGATPLHIAADNGSLELINCLLKAGADPNVSDEDGVKPIQVAAARGNRGVVEILFPLTSKIDSLPTWTVDGIIEYMQSETKKQQDESVNAKDTSQPKDTVSQKQNVPEVAPEVKKRAAEAKSRGSEAFERKDYNMAIDSYTQVNSPDLLFDS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3502 369 ProSiteProfiles Ankyrin repeat region circular profile. 186 215 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat region circular profile. 218 250 - -
Dod01g3502 369 MobiDBLite consensus disorder prediction 326 345 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Dod01g3502 369 MobiDBLite consensus disorder prediction 297 345 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat profile. 153 185 IPR002110 GO:0005515
Dod01g3502 369 SUPERFAMILY Ankyrin repeat 19 273 IPR036770 -
Dod01g3502 369 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 359 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat region circular profile. 88 114 - -
Dod01g3502 369 Gene3D - 154 324 IPR036770 -
Dod01g3502 369 Gene3D - 5 153 IPR036770 -
Dod01g3502 369 Pfam Ankyrin repeats (3 copies) 196 272 IPR002110 GO:0005515
Dod01g3502 369 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Dod01g3502 369 Pfam Ankyrin repeats (3 copies) 122 182 IPR002110 GO:0005515
Dod01g3502 369 PRINTS Ankyrin repeat signature 169 183 IPR002110 GO:0005515
Dod01g3502 369 PRINTS Ankyrin repeat signature 122 137 IPR002110 GO:0005515
Dod01g3502 369 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 359 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat region circular profile. 121 153 - -
Dod01g3502 369 ProSiteProfiles Ankyrin repeat profile. 88 120 IPR002110 GO:0005515
Dod01g3502 369 ProSiteProfiles Ankyrin repeat profile. 121 153 IPR002110 GO:0005515
Dod01g3502 369 ProSiteProfiles Ankyrin repeat profile. 186 218 IPR002110 GO:0005515
Dod01g3502 369 ProSiteProfiles Ankyrin repeat region circular profile. 153 182 - -
Dod01g3502 369 SMART ANK_2a 54 84 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 153 182 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 88 117 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 121 150 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 251 280 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 186 215 IPR002110 GO:0005515
Dod01g3502 369 SMART ANK_2a 218 247 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3502 125 331 Ion Channels AT4G32500 29.048 3.40e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3502 - - gmx:100798118 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3502 01 76246775 76250902 Dod01g3502 01 76246775 76250902 ECH