Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3492 ATGGAAAGGGTGTTCTCGGTGGAGGAAATATCGGAGCCGTTTTTGATGCCGGCGAAAGCCATGGCTATAGAAGAGTCAAAGTCACCGATGAACCGGAGTGCTTCGGAGTGGGCGTTCCAGCGGTTCCTGCAGGAAGCATCTTCTTGTGCAGAGTCAGTGGCGTCACCGTGTTGTTCTTCTTCTTCATCCTCTGTGGTTGAGATCAAACAGGATATAGTAGAAACCAAGCCCCTTCAAAACAATGCTACCCTTTTGGCCAATGGAAGTGGAACTGCTTCTCAATCTCAATCTCAATCTCAACCTGATTCTGTGCTGGTTGATTCAGAGGACTACCAGGCTATCCTCAAAACCAAGCTCAATCTCGCTTGTGCCGCCGTTGCTTTGACTCGGGGGTCTTTGATCAAATCTCAAGATCCAGCCACTTTTAATGACAATGGATCACCTGCGTCAAATCCATCTCAACTTGGATCTCAGGCTACTTTAAAAGGATCTGGCCCTTCTGGAAATGATCCATCTAAATTACAAAACAAAGATGCCAAAGTGCCAGTTGGGACCCCTTCCTTGCCTGCCATACAAGATAAACCTGCTGTTGCAATCAGATCAACCACAAGTGGATCATCTAAAGATCAGTCAGATGATGAGGAAACTGAGGGAGAGATTAATATGACTGAAAACATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCCAGACGCTCGAGAAGGAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTTTCTCAATTAAGAGGTGAAAATTCGTCATTGTTGAAGCGGCTTACAGATATAAGCCAGAAATACAGTGATGCTGCTGTTGATAACAGAGTATTAAAAGCTGATGTTGAAACACTAAGAGCAAAGGTGAAGATGGCTGAAGAGACGGTCAAAAGAATTACCGGGTTGAACCCGATGCTTCATGCCATGTCTGAGATAACGTCGATTGGAATGCCATCATTTGATGGAAGCCCTTCTGACACGTCAGCGGATTCGGCCTGTTCCTGTCCGAGAAGACCCAAATCAAAACTTTTATCAACCCACCTCTAA 1092 0.4579 MERVFSVEEISEPFLMPAKAMAIEESKSPMNRSASEWAFQRFLQEASSCAESVASPCCSSSSSSVVEIKQDIVETKPLQNNATLLANGSGTASQSQSQSQPDSVLVDSEDYQAILKTKLNLACAAVALTRGSLIKSQDPATFNDNGSPASNPSQLGSQATLKGSGPSGNDPSKLQNKDAKVPVGTPSLPAIQDKPAVAIRSTTSGSSKDQSDDEETEGEINMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISQKYSDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMLHAMSEITSIGMPSFDGSPSDTSADSACSCPRRPKSKLLSTHL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3492 363 MobiDBLite consensus disorder prediction 139 174 - -
Dod01g3492 363 SUPERFAMILY Leucine zipper domain 232 282 IPR046347 GO:0003700|GO:0006355
Dod01g3492 363 MobiDBLite consensus disorder prediction 331 363 - -
Dod01g3492 363 SMART brlzneu 228 292 IPR004827 GO:0003700|GO:0006355
Dod01g3492 363 MobiDBLite consensus disorder prediction 139 231 - -
Dod01g3492 363 PANTHER BASIC LEUCINE ZIPPER 63 1 350 - -
Dod01g3492 363 PANTHER BZIP TRANSCRIPTION FACTOR 1 350 - -
Dod01g3492 363 Coils Coil 241 275 - -
Dod01g3492 363 Coils Coil 290 310 - -
Dod01g3492 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Dod01g3492 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 282 IPR004827 GO:0003700|GO:0006355
Dod01g3492 363 Gene3D - 231 285 - -
Dod01g3492 363 Pfam bZIP transcription factor 231 284 IPR004827 GO:0003700|GO:0006355
Dod01g3492 363 Pfam Basic leucine-zipper C terminal 299 349 IPR020983 -
Dod01g3492 363 MobiDBLite consensus disorder prediction 331 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3492 Dod-Chr1 76153466 76158322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3492 1 321 bZIP Transcription Factor Family AT4G02640 39.458 4.33e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g3492 bZIP_C 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3492 K25784 - gmx:778135 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3492 01 76153466 76158322 Dod01g3492 01 76153466 76158322 ECH
Dod01g3492 01 76153466 76158322 Dod06g1670 06 22740095 22744823 PCT