Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3480 ATGGGGAAGGCGGGTAAATGGATTAGAAACTTTCTTATGGGGAAAAAGGAAGAAAAGTACAAGAAGATTGATGCAATCTGCACCGAGAATAAGAGCGCCAACATGGATAGTCCCAAAGTGAAGCGCAGATGGAGCTTTGGAAGACTAACAGGTGGAAGAACAACAGGCAAGGTAGCAGGTCATAAACTTTCCATATCTTTTGATTCAGGTAACACTGCCGAACTGCAAATACAAGCTTTGCTGCAAACTCAGGCTCCAAGGAGTCTTCCAACCGCACAGGCACAGGTTTTTGTTCAAGACACTAAACTTAGAAGCTTAGCCGCTACAAAGATTCAGGCTGCTTTTCGCTCATATCTGGCTAGGAAAGCATTGCATGCTTTAAGGGGATTGGTCAAGTTGCAGGCACTAGTAAGGGGTCACCTTGTACGGAAGCAAACAACCACAACTCTCCGTGGCATGCATGCGTTGATGACCATACAAGTTAGAGCCCGAATTCAAAGAATTCAGATGGTAGAGGAAGCAAATCTACTTGGAAAACAGCCTATGCAACACACACAAATTCCACACAGCAAAGGTCTCAAAAGAGAAGATAAAGATTCAAAGGATATGAGTGTGGAAGAAATGCTGCGGGCTTTGAAAAGCAGAAGGGGTTCCCTGGATCGTTCGCATTTTAAGAATATAAAGCATGATTCCATGACCTTCTATTCAAAGCCCAAGTCAGTTTCAGAAAGACATGAGTACACTGAGAATAATTTAATGACAGCACCAAACAGCCCAGAAAACTACTGGGCCTTGTCGGAATTTGACCCAACAACAATTGTCTCATCAACTTCTCAGCGCCACCCAGCGTCCCACCGGCAATCATGGTCACCAAGTTACATGAACAATACAGAATCCTCAAAGGCTAAAGCAAGGTCTCAGAGTGAACCAAAGCAAAGACCCAAAGGGGGAACGAAGCAGAAAAGTAAGTCCGCAGAATCTACAAAAGAACTGATTACCTCAGTGAATGGTCCAAGACAAAATCTGCACTCAAACTCTTCACGCTTTGATCACGGACGTCTAGACCATTGGATTATCAACCTTGATGGGTCAACAAAGGACAGCAGGCGCGATTCCTTCGAAAGCAGCACGATGACTTCTGATTCCTACAACTGA 1155 0.4442 MGKAGKWIRNFLMGKKEEKYKKIDAICTENKSANMDSPKVKRRWSFGRLTGGRTTGKVAGHKLSISFDSGNTAELQIQALLQTQAPRSLPTAQAQVFVQDTKLRSLAATKIQAAFRSYLARKALHALRGLVKLQALVRGHLVRKQTTTTLRGMHALMTIQVRARIQRIQMVEEANLLGKQPMQHTQIPHSKGLKREDKDSKDMSVEEMLRALKSRRGSLDRSHFKNIKHDSMTFYSKPKSVSERHEYTENNLMTAPNSPENYWALSEFDPTTIVSSTSQRHPASHRQSWSPSYMNNTESSKAKARSQSEPKQRPKGGTKQKSKSAESTKELITSVNGPRQNLHSNSSRFDHGRLDHWIINLDGSTKDSRRDSFESSTMTSDSYN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3480 384 MobiDBLite consensus disorder prediction 274 384 - -
Dod01g3480 384 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Dod01g3480 384 Gene3D - 103 156 - -
Dod01g3480 384 MobiDBLite consensus disorder prediction 274 303 - -
Dod01g3480 384 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Dod01g3480 384 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Dod01g3480 384 SMART iq_5 126 147 IPR000048 GO:0005515
Dod01g3480 384 SMART iq_5 103 125 IPR000048 GO:0005515
Dod01g3480 384 MobiDBLite consensus disorder prediction 346 374 - -
Dod01g3480 384 MobiDBLite consensus disorder prediction 304 326 - -
Dod01g3480 384 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Dod01g3480 384 Pfam Protein of unknown function (DUF4005) 275 341 IPR025064 -
Dod01g3480 384 PANTHER IQ-DOMAIN 5-RELATED 1 371 - -
Dod01g3480 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 147 IPR027417 -
Dod01g3480 384 MobiDBLite consensus disorder prediction 181 203 - -
Dod01g3480 384 MobiDBLite consensus disorder prediction 189 203 - -
Dod01g3480 384 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 371 - -
Dod01g3480 384 MobiDBLite consensus disorder prediction 327 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3480 Dod-Chr1 75975016 75976531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3480 1 314 IQD Protein Family AT4G14750 35.494 3.07e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3480 - - lang:109345769 477.633