Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3471 ATGAATGAGCTTGAACCAAATTACTCTTCTGAGTTCGTCGAAGTTGATCCAAGTGGCAGATATGGCAGATACAATGAAATCCTAGGCAAAGGAGCTTCCAAGACAGTGTATAGAGCATTTGACGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTGTATGATTTCCTGCAAAGTCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTCCTCAAAACATTGAAGCACAGAAACATTATGAAGTTTTACACCTCTTGGGTTGATACTGCCAATAGGAATATTAATTTCGTGACTGAAATGTTCACATCTGGGACTCTTAGACAGTATAGGCTAAAACACAGGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGGCAGATCCTGAGAGGGCTTCTCTATCTTCATAGCCATGACCCGCCCGTGATCCATAGAGATCTCAAATGTGATAATATTTTTATCAATGGAAATCAAGGGGAAGTAAAGATTGGAGATCTTGGCCTCGCAGCAATTCTCCGGAAATCCCATGTTGCTCATTGTGTCGGAACGCCCGAGTTCATGGCTCCTGAAGTATATGAAGAGGCATATAATGAATTAGTCGATATATATTCCTTTGGGATGTGTGTATTAGAAATGGTAACATTTGAATATCCTTATAGCGAATGCAATAACCCAGCACAAATCTACAAGAAAGTTATTTCTGGTAAAAAACCAGATGCTTTGTATAAAGTAAAGGATCCAGAAGTGCGACAATTTATTGAGAAATGCTTGGCAACAGTGTCTCTCAGGCTCTCTGCTAAGGAGCTTCTAGATGATCCTTTTCTTCGAAGTGATGATTATGAATACGATTTGGGACCTATAGACAATGGAGCATTGGATGACTTAGGTTCTCATGTCAGTCAGCCCTTCTTTGATCTACATCAGAGCTATAGTAACTTTGGCACAGAATACTCATATGGCTTTGGATATGAAGGAGAGGAGTGTTCTCATCCAGCTGAGATTGAACCTAGTGGAATTGAACTCTTCGAGTGTCATGATGATGAGCCTTCTGAAGACGTGGACATAAGCATCAAAGGGAAGAGGAAAGACGATGGGGGTATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGTCGTATTCGAAACATTTATTTCCCGTTTGACATAGAGATTGACACACCATTAAGTGTAGCGACTGAAATGGTTGCTGAACTAGACATTACTGATCAGGATGTTACCAGAATAGCAGATATGATAGACGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCAGAATCAGGGGTTGAGGAAACTCCTCCTTTTTTAAGTCAAAGTTTCTGCCACAATTGTGTGCCTAATCGTACTTCGGGTGGCTCTCTTATGGATTTTCTTTCACATAATAATCATGATGAAAAGAATTTGCAGCTTCTTCAGTGCTGTAGGCATGGATGTGCTTCAACGCACGGGCGGTTTGAGGAGATTACTTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGGATGCACCTAACATATCAAGCCAATCAGACTGCTTCCAGTATCAGGATTTATGGAGTCGGCGAGAAAGTCGTGAATTGAGTCCAGTAGAGTCTGACCAAAGCCATTCTGACGAACACTTTGAACAATTAGATCAATTGGTATTAGCCAAAGAAAAAGGACAGGATGTTTGGCAAAACCAGTTTGCATCCGACATGGGAAAATCTTTGCGAAATTTATCAGGAACTCATTGTTTATCAACTATCCGATATAGTGGCCTTGATGATGAATATGAGAAAGAGATCCAACAAGAATTGAGATGGCTCAGAGGAAGATACCAAATGGAGTTGAGAGACCTTAGGGTTCAGTGGCTCAGTCTAACAGATAAATCTTCACACACTAGTGACAGAGAGCACAAACCAGAAAATCGATTTACGCCACGGTCAATGACAGAAACAATAAAAGGAGATGAACATGGCATTGACTTGAAACCCTTTGGTAACCACTGGCGTAGTGATGTCAGTTGCCATTCGCAAGTCCAAAAGGGCCACCTCAGTTTGGACACCCAAAATTGTGAGGTGGTGTGTTCTCCAGGAAAAGCTACGGTTATTGCAAAGAGTTTTCACACAGGATCTTTGCTTCCAGACTCTCTACACAGGACAGTTTCACTCCCTGTTGATGCTGTGGATATATAA 2208 0.4135 MNELEPNYSSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHVAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTFEYPYSECNNPAQIYKKVISGKKPDALYKVKDPEVRQFIEKCLATVSLRLSAKELLDDPFLRSDDYEYDLGPIDNGALDDLGSHVSQPFFDLHQSYSNFGTEYSYGFGYEGEECSHPAEIEPSGIELFECHDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEIDTPLSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWKPESGVEETPPFLSQSFCHNCVPNRTSGGSLMDFLSHNNHDEKNLQLLQCCRHGCASTHGRFEEITFQSEEYDNHVREDAPNISSQSDCFQYQDLWSRRESRELSPVESDQSHSDEHFEQLDQLVLAKEKGQDVWQNQFASDMGKSLRNLSGTHCLSTIRYSGLDDEYEKEIQQELRWLRGRYQMELRDLRVQWLSLTDKSSHTSDREHKPENRFTPRSMTETIKGDEHGIDLKPFGNHWRSDVSCHSQVQKGHLSLDTQNCEVVCSPGKATVIAKSFHTGSLLPDSLHRTVSLPVDAVDI* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3471 735 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 372 426 IPR024678 GO:0004674|GO:0005524
Dod01g3471 735 Gene3D Phosphorylase Kinase; domain 1 7 103 - -
Dod01g3471 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Dod01g3471 735 Gene3D Transferase(Phosphotransferase) domain 1 105 286 - -
Dod01g3471 735 SUPERFAMILY Protein kinase-like (PK-like) 25 280 IPR011009 -
Dod01g3471 735 ProSiteProfiles Protein kinase domain profile. 22 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3471 735 CDD STKc_WNK 20 279 - -
Dod01g3471 735 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 4 724 - -
Dod01g3471 735 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3471 735 SMART serkin_6 22 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3471 735 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 724 - -
Dod01g3471 735 Gene3D - 355 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3471 Dod-Chr1 75873379 75877676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3471 10 508 MAP Kinase Kinase Kinase AT3G22420 58.932 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod01g3471 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3471 K08867 - gmx:100775959 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3471 01 75873379 75877676 Dod06g1689 06 23059827 23062556 PCT