Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3468 ATGGCATCGGAGCAACACGACACCGTTTTCCCCGAAGAAGACATGGACGACGACGACGAGGAGTCCCAAGAGGACGAAGAAGAGGAAGACATCATGGACGACGACGAAGAAGAAAACGACCCCTCCCCTTCCACCTCCTCCGCCGCCCTCGCCGTCACCGTCGCCGTCCCCTCTTCCGCCCTCCCCAACGGCGACAACAACGCCCCGATTCCCTCCGCCTCCACCGCCACAGTCGTCGTCGCTGCCGCCGCAGAAGGAGGCTCCTCCGATCCAAAACGGCCGCAAATCGAGGAGAAGAAGCCGCTCGACGATTCCCGGAGGCTGTTCCAGCGTCTGTGGACCGACGAGGACGAGATCGAGCTCCTCCAAGGGTTCCTGGACTACACGTCGCAGCGAGGCTCCTCTCACCACAACGACACCGCCTTGTTCTACGACCAAATCAAGTCGAAGCTCCAGCTCGATTTCAACAAGAACCAGCTGGTGGAGAAGATCCGGAGGCTGAAGAAGAAGTACCGCAACGTGCTCACCAAGATTGGCTCCGGCAAGGAATTCTCCTTCAAGAGCCCTCACGATCAAGCCACGTTCGAGATTTCCCGCAAGATCTGGAGCAACATGGGCCAAATCGCCGATAATTCCCTTGACGACGACGAAATCAACCTCAACCCAAACCCTAACCCTAACTTTAACGCTAATTTCGCCCTCTGCACGCCGAGGACCGATCCGGCGGCGTTGTTGTTCGGGAATTCAGCCGAGAAGAAGACAACGCCGTCGCGGAAGCGGTCGCGGCCTCGATCGGCGGTGAGAACTGATCATCAGCACGAACCGAACGAAGGAGGGTCGGCGTCGCAGAAGGATCATCATAACTTCGTCATCAACAACGCGGCCACCACCGGTACCGGTACCGGTGGTGGTGCCGGCGCCGGTGCCGGTGCCGGTGCCGGTGCTAATACTCACAGTAACAACAACAACGATTGTAACAGTGGATATAGCATACCTGGTTTGGTTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGTTGGTGAAGGAGTTGGTGGGCGGTGTGGGCATGGGAGGGGCTTTTGCTTTTGGGGGAAGAGGGTTTGGAGGGTTGGGGTTGAATCCGATGATGATGATGCCGTTTGGGTTGGGAGTGACGAATTTGGGGGGTGGTGGTGGGGAAGTGGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAGCTTGAAGTGTACTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCTGCACTTGACGACTTGCGGTCAACTGGTGGACCCTGA 1305 0.5755 MASEQHDTVFPEEDMDDDDEESQEDEEEEDIMDDDEEENDPSPSTSSAALAVTVAVPSSALPNGDNNAPIPSASTATVVVAAAAEGGSSDPKRPQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLTKIGSGKEFSFKSPHDQATFEISRKIWSNMGQIADNSLDDDEINLNPNPNPNFNANFALCTPRTDPAALLFGNSAEKKTTPSRKRSRPRSAVRTDHQHEPNEGGSASQKDHHNFVINNAATTGTGTGGGAGAGAGAGAGANTHSNNNNDCNSGYSIPGLVEETVRSCLSPLVKELVGGVGMGGAFAFGGRGFGGLGLNPMMMMPFGLGVTNLGGGGGEVVDEKWRKQQILELEVYSKRLELVQDQIKAALDDLRSTGGP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3468 434 MobiDBLite consensus disorder prediction 10 41 - -
Dod01g3468 434 PANTHER BNAANNG10740D PROTEIN-RELATED 1 432 IPR007592 GO:0006355
Dod01g3468 434 MobiDBLite consensus disorder prediction 246 285 - -
Dod01g3468 434 Coils Coil 407 427 - -
Dod01g3468 434 MobiDBLite consensus disorder prediction 42 70 - -
Dod01g3468 434 Pfam Protein of unknown function, DUF573 109 203 IPR007592 GO:0006355
Dod01g3468 434 MobiDBLite consensus disorder prediction 1 70 - -
Dod01g3468 434 Coils Coil 157 177 - -
Dod01g3468 434 PANTHER BNAANNG10740D PROTEIN 1 432 - -
Dod01g3468 434 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3468 Dod-Chr1 75853081 75854968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3468 1 430 GeBP Transcription Factor Family AT5G28040 43.006 3.07e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Dod01g3468 DUF573 5.6e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3468 - - gmx:100790030 387.111