Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3460 ATGGCAATTGACTTCTCAAGAATCACCCTGAGGCCGTTCAAGCTAAGCGACGTTGAAGATTTCATGTTAATGGCAGGTGATGATAGAGTGACTTACTGTACCCGATGGAACGCATTTGATTCCGAGGAACAGGCGTTGACTTACATTGGAGATGTGTGCATGCCTCACCCTTGGACTCGGTCCATATGCATTGATGATTGTTCGATTGGATATATCTCCGTCTCTCCAGGATCGGGTGATGACAAGTGTAGGGGAGAGGTTGGCTATGCCGTAGCCGCCAAGTATTGGGGCAAAGGGATATGTACCAAAGCACTGAAGATTGCTGTGTCACAAGTCTTCAATGACTTCCCTGAGTTGTTAAGGTTACAAGCTTTTGCTGATGAAGAGAACTTGGCTTCCCAGAGGGTATTGGAGAAGGCAGGGTTCTTTAGCGAGGGCATACTGAGAAAGCACTCGTATGTCAAGGGGAAGGTTAGGGATGTGGCAATTTTTAGTCTCGTGTTAGCGGATACTCATCCATGA 522 0.4713 MAIDFSRITLRPFKLSDVEDFMLMAGDDRVTYCTRWNAFDSEEQALTYIGDVCMPHPWTRSICIDDCSIGYISVSPGSGDDKCRGEVGYAVAAKYWGKGICTKALKIAVSQVFNDFPELLRLQAFADEENLASQRVLEKAGFFSEGILRKHSYVKGKVRDVAIFSLVLADTHP* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3460 173 Gene3D - 3 168 - -
Dod01g3460 173 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 166 IPR016181 -
Dod01g3460 173 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 160 IPR000182 GO:0016407
Dod01g3460 173 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 172 - -
Dod01g3460 173 Pfam Acetyltransferase (GNAT) domain 7 142 IPR000182 GO:0016407
Dod01g3460 173 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3460 Dod-Chr1 75709086 75709607 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod01g3460 Acetyltransf_3 2.5e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3460 - - mtr:MTR_3g463610 248.054