Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3459 ATGGCTGATCCTGGCACACTTATCCCAGCTGATATTTCAAGTGCAAAGGATACTTCCTTTATGCCTTACAATCCCAAGGTTTTGCCAAGTTTACCTTCCACTAAGGAAACTGATTTTTCTTACACAAGACCAATGCCATCTCATGGAGAAGGCAGTAGTCAAAATCCTTTGATAAGAAGTGGTTCATCCCCACTGAATGGAAAATCATATTTTGATAAGTCAGCTTCAAGCTTTGATTTGAATGGAGACACTGGTATTGGTCCTTCTAAAATTTCTAGCAGTGGGACTCCTAATCAACAAGAAAATATTGCACAACCATCCAGTGCTTCTCTGTTCAAGGGGACTCATAGAGTAAATGTGACCAGCGATAGGACAAGACTGAATGCCAATGTTGTACCATATGACCAGAATAGCCCCGATGATTCTCAGAGCCTTTTTGCAGATCTTAACCCTTTCCAGATAAAAGGAATTGGGAAGACCTCTGTGCATAACAAAACGGTGGCAAATAAAGCTCCTGAGCTTCAGAGTACAAGAAACAATACTGTTTCTAGTCGACCACCTGTCCCACCACTCATGTGGAAGAATCATTATGCTTACAATGAAGTCCCTAGGAACAATAATCGTGATCCTAATGAATATGGCCCACCTTTATTAGCTTCAAATAGTTCTTCCATATCTGAAAAGATTGATCTCAAAGGCTCCAAATCATCATACTATTCAAACATAAATAATGATAGAAATACTAAAAAAATGGCTCAAGTCAGTGGTTCAGCGTTACCATCCGGTGCAGGTGAACTGAAGAGGGAGGAGGATGTCAGCATTGATTGTAACAGAGGGAATGTGGAAATATTTCAAAATGACATGGATGATGTGGTTAAAGTACATGAAAACATTGAAAGTAGTCGATTTGACACAAGGAAGGGCACACGTGACAGATTCATGGGTGAAAATCTGAAATTAAGGGATCCTCAAAGTCATAGCTTTTCAGTTGATTCCATCACGAAAAGGATTCATCAAATATTGGATGACGTAGATGTCAGTGAATGTGAGATTCCTTGGGAGGATCTGGATATTGGTGAAAGAATTGGTCTAGGTTCATATGGGGAGGTATACCATGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAACTTTTGGAACAGGATTTTTCAGGCGATGCCTTGATTGAATTCAAAAGAGAAGTACGAATAATGCGTAGATTACGTCACCCAAATGTTATTCTTTTTATTGGTGCTGTTACTCGTCCTCCCAATCTTTCAATCATTACAGAGTTTCTTCCAAGAGGAAGCTTGTATCGAATTCTTCATCATCCTAACTGTCAGATTGATGAGAAACGAAGGATAAAAATGGCTCTGGATGTGGCCAGAGGCATGAATTGCTTACATAGCAGCACACCTACAGTCGTTCACCGAGATCTGAAGTCCCCAAATCTTTTAGTAGACAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCACGCTTGAAACACAACACGTTTTTGTCATCCAAGTCAACCGCTGGATCGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGACGTCTACAGTTTTGGGGTCATCCTATGGGAGCTTGCCACTCTCAGGTTGCCCTGGAGTGAAATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAAAACCGTCGCCTTGATATCCCTAAGGATGTTGATCCTATAGTTGCAAGAATAATCTGGGAATGCTGGCAACAGGATCCAAATTTGCGTCCGTCATTTGCACAGCTCACAGTGGCTTTAAAGTCCCTTCAACGTCTAGTTATCTCGTCTTGTCAAGACCAGCCAGATTCTTCAAAGCCACAAGAGATCTCTGTAAATTCTACCCCTTGA 1914 0.4159 MADPGTLIPADISSAKDTSFMPYNPKVLPSLPSTKETDFSYTRPMPSHGEGSSQNPLIRSGSSPLNGKSYFDKSASSFDLNGDTGIGPSKISSSGTPNQQENIAQPSSASLFKGTHRVNVTSDRTRLNANVVPYDQNSPDDSQSLFADLNPFQIKGIGKTSVHNKTVANKAPELQSTRNNTVSSRPPVPPLMWKNHYAYNEVPRNNNRDPNEYGPPLLASNSSSISEKIDLKGSKSSYYSNINNDRNTKKMAQVSGSALPSGAGELKREEDVSIDCNRGNVEIFQNDMDDVVKVHENIESSRFDTRKGTRDRFMGENLKLRDPQSHSFSVDSITKRIHQILDDVDVSECEIPWEDLDIGERIGLGSYGEVYHADWNGTEVAVKKLLEQDFSGDALIEFKREVRIMRRLRHPNVILFIGAVTRPPNLSIITEFLPRGSLYRILHHPNCQIDEKRRIKMALDVARGMNCLHSSTPTVVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGSPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSEMNPMQVVGAVGFQNRRLDIPKDVDPIVARIIWECWQQDPNLRPSFAQLTVALKSLQRLVISSCQDQPDSSKPQEISVNSTP* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3459 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Dod01g3459 637 SUPERFAMILY Protein kinase-like (PK-like) 345 620 IPR011009 -
Dod01g3459 637 Pfam Protein tyrosine and serine/threonine kinase 357 606 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 1 628 - -
Dod01g3459 637 ProSiteProfiles Protein kinase domain profile. 356 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3459 637 Gene3D Transferase(Phosphotransferase) domain 1 435 619 - -
Dod01g3459 637 Gene3D Phosphorylase Kinase; domain 1 349 433 - -
Dod01g3459 637 PRINTS Tyrosine kinase catalytic domain signature 430 443 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 PRINTS Tyrosine kinase catalytic domain signature 469 487 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 PRINTS Tyrosine kinase catalytic domain signature 535 557 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 PRINTS Tyrosine kinase catalytic domain signature 516 526 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 PRINTS Tyrosine kinase catalytic domain signature 579 601 IPR001245 GO:0004672|GO:0006468
Dod01g3459 637 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Dod01g3459 637 MobiDBLite consensus disorder prediction 1 113 - -
Dod01g3459 637 PANTHER SERINE-THREONINE PROTEIN KINASE 1 628 - -
Dod01g3459 637 CDD STKc_MAP3K-like 362 605 - -
Dod01g3459 637 SMART serkin_6 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3459 637 MobiDBLite consensus disorder prediction 30 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3459 Dod-Chr1 75708852 75715788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3459 1 592 MAP Kinase Kinase Kinase AT1G08720 54.860 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod01g3459 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3459 - - gmx:100818780 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3459 01 75708852 75715788 Dod01g3459 01 75708852 75715788 ECH