Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3458 ATGAAGAACATTTTCAAGAAGCTTCACATAGGGACCAACCACGACCCTAACCGTTCCAACGAAACTCCTCCTCCCGCTGCATCGCCGTCATGCGCCGCCGATCATTGCGCAGTTCAGAGTTCAGGCTCCTCTCCGGCCACTCCTTCTCCTTTGTCATCGCCGTCTCCGGCGGCCGTTACGCCTCCCGCCGCTTTCTCTACGGCAGCTTCCGCGGCCAACCGGCAGGACTACCTGTCATCGGAGGAGGAGTATCAGATTCAGCTGGCCCTCGCCATAAGCGCTTCTTCCAAATCGGAATTCCGCGACGATCCTCAGATACGATCGGCGACGCTGCTTAGCTTGGGAGGACATCGAACCGACTCCACAAGAAACGACGACGGTGTTGCGGAGGCGCTGTCTAGGCATTACTGGGAATATAATGTGCTCGACTATGAGCAGAAAGTTGTAGATGGATTTTATGATGTATATGGGCTTTATACTGATTCAGCAATGCAAGGAAAGATGCCATCTCTCGCAGATCTTGAAGCAAAACCTGAAAGTTCTGGCTTTGAAGTTGTCATAGTTGATTGTAGAATTGATCCTGCTCTTGAAGAGCTGTTGCAAATTGCACATTGTATTGCATTAGACTGCCCTGTCACTAGAGTTGGTATTCTGGTACAAAGGCTTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTGAAGGATGCTAGTGTTATATTGGCAAGATGGACAGAAAGAAGTACAGAGCTAAGGACATCTCTACACACAAGCATGTTGCCTCTTGGGTCCATAAATATTGGGCTCTCCAGACACCGTGCTTTGCTTTTCAAGGTATTAGCTGACAATGTCAATATGCCTTGTAGACTGGTTAAAGGCAGTCATTATACTGGTGTTGAGGATGATTCTGTAAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGATCCTGGCACACTTATCCCAGCTGATATTTCAAGTGCAAAGGATACTTCCTTTATGCCTTACAATCCCAAGGTTTTGCCAAGTTTACCTTCCACTAAGGAAACTGATTTTTCTTACACAAGACCAATGCCATCTCATGGAGAAGGCAGTAGTCAAAATCCTTTGATAAGAAGTGGTTCATCCCCACTGAATGGAAAATCATATTTTGATAAGTCAGCTTCAAGCTTTGATTTGAATGGAGACACTGGTATTGGTCCTTCTAAAATTTCTAGCAGTGGGACTCCTAATCAACAAGAAAATATTGCACAACCATCCAGTGCTTCTCTGTTCAAGGGGACTCATAGAGTAAATGTGACCAGCGATAGGACAAGACTGAATGCCAATGTTGTACCATATGACCAGAATAGCCCCGATGATTCTCAGAGCCTTTTTGCAGATCTTAACCCTTTCCAGATAAAAGGAATTGGGAAGACCTCTGTGCATAACAAAACGGTGGCAAATAAAGCTCCTGAGCTTCAGAGTACAAGAAACAATACTGTTTCTAGTCGACCACCTGTCCCACCACTCATGTGGAAGAATCATTATGCTTACAATGAAGTCCCTAGGAACAATAATCGTGATCCTAATGAATATGGCCCACCTTTATTAGCTTCAAATAGTTCTTCCATATCTGAAAAGATTGATCTCAAAGGCTCCAAATCATCATACTATTCAAACATAAATAATGATAGAAATACTAAAAAAATGGCTCAAGTCAGTGGTTCAGCGTTACCATCCGGTGCAGGTGAACTGAAGAGGGAGGAGGATGTCAGCATTGATTGTAACAGAGGGAATGTGGAAATATTTCAAAATGACATGGATGATGTGGTTAAAGTACATGAAAACATTGAAAGTAGTCGATTTGACACAAGGAAGGGCACACGTGACAGATTCATGGGTGAAAATCTGAAATTAAGGGATCCTCAAAGTCATAGCTTTTCAGTTGATTCCATCACGAAAAGGATTCATCAAATATTGGATGACGTAGATGTCAGTGAATGTGAGATTCCTTGGGAGGATCTGGATATTGGTGAAAGAATTGGTCTAGGTTCATATGGGGAGGTATACCATGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAACTTTTGGAACAGGATTTTTCAGGCGATGCCTTGATTGAATTCAAAAGAGAAGTACGAATAATGCGTAGATTACGTCACCCAAATGTTATTCTTTTTATTGGTGCTGTTACTCGTCCTCCCAATCTTTCAATCATTACAGAGTTTCTTCCAAGAGGAAGCTTGTATCGAATTCTTCATCATCCTAACTGTCAGATTGATGAGAAACGAAGGATAAAAATGGCTCTGGATGTGGCCAGAGGCATGAATTGCTTACATAGCAGCACACCTACAGTCGTTCACCGAGATCTGAAGTCCCCAAATCTTTTAGTAGACAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCACGCTTGAAACACAACACGTTTTTGTCATCCAAGTCAACCGCTGGATCGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGACGTCTACAGTTTTGGGGTCATCCTATGGGAGCTTGCCACTCTCAGGTTGCCCTGGAGTGAAATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAAAACCGTCGCCTTGATATCCCTAAGGATGTTGATCCTATAGTTGCAAGAATAATCTGGGAATGCTGGCAACAGGATCCAAATTTGCGTCCGTCATTTGCACAGCTCACAGTGGCTTTAAAGTCCCTTCAACGTCTAGTTATCTCGTCTTGTCAAGACCAGCCAGATTCTTCAAAGCCACAAGAGATCTCTGTAAATTCTACCCCTTGA 2871 0.4378 MKNIFKKLHIGTNHDPNRSNETPPPAASPSCAADHCAVQSSGSSPATPSPLSSPSPAAVTPPAAFSTAASAANRQDYLSSEEEYQIQLALAISASSKSEFRDDPQIRSATLLSLGGHRTDSTRNDDGVAEALSRHYWEYNVLDYEQKVVDGFYDVYGLYTDSAMQGKMPSLADLEAKPESSGFEVVIVDCRIDPALEELLQIAHCIALDCPVTRVGILVQRLAELVTSHMGGPVKDASVILARWTERSTELRTSLHTSMLPLGSINIGLSRHRALLFKVLADNVNMPCRLVKGSHYTGVEDDSVNIIKLEDEREFLVDLMADPGTLIPADISSAKDTSFMPYNPKVLPSLPSTKETDFSYTRPMPSHGEGSSQNPLIRSGSSPLNGKSYFDKSASSFDLNGDTGIGPSKISSSGTPNQQENIAQPSSASLFKGTHRVNVTSDRTRLNANVVPYDQNSPDDSQSLFADLNPFQIKGIGKTSVHNKTVANKAPELQSTRNNTVSSRPPVPPLMWKNHYAYNEVPRNNNRDPNEYGPPLLASNSSSISEKIDLKGSKSSYYSNINNDRNTKKMAQVSGSALPSGAGELKREEDVSIDCNRGNVEIFQNDMDDVVKVHENIESSRFDTRKGTRDRFMGENLKLRDPQSHSFSVDSITKRIHQILDDVDVSECEIPWEDLDIGERIGLGSYGEVYHADWNGTEVAVKKLLEQDFSGDALIEFKREVRIMRRLRHPNVILFIGAVTRPPNLSIITEFLPRGSLYRILHHPNCQIDEKRRIKMALDVARGMNCLHSSTPTVVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGSPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSEMNPMQVVGAVGFQNRRLDIPKDVDPIVARIIWECWQQDPNLRPSFAQLTVALKSLQRLVISSCQDQPDSSKPQEISVNSTP* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3458 956 PANTHER SERINE-THREONINE PROTEIN KINASE 69 947 - -
Dod01g3458 956 MobiDBLite consensus disorder prediction 400 432 - -
Dod01g3458 956 CDD STKc_MAP3K-like 681 924 - -
Dod01g3458 956 Pfam Protein tyrosine and serine/threonine kinase 676 925 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 PRINTS Tyrosine kinase catalytic domain signature 835 845 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 PRINTS Tyrosine kinase catalytic domain signature 898 920 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 PRINTS Tyrosine kinase catalytic domain signature 749 762 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 PRINTS Tyrosine kinase catalytic domain signature 788 806 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 PRINTS Tyrosine kinase catalytic domain signature 854 876 IPR001245 GO:0004672|GO:0006468
Dod01g3458 956 SUPERFAMILY Protein kinase-like (PK-like) 654 923 IPR011009 -
Dod01g3458 956 SMART serkin_6 675 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3458 956 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Dod01g3458 956 Gene3D Phosphorylase Kinase; domain 1 668 752 - -
Dod01g3458 956 MobiDBLite consensus disorder prediction 34 48 - -
Dod01g3458 956 MobiDBLite consensus disorder prediction 1 61 - -
Dod01g3458 956 ProSiteProfiles Protein kinase domain profile. 675 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3458 956 MobiDBLite consensus disorder prediction 350 385 - -
Dod01g3458 956 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Dod01g3458 956 Gene3D Transferase(Phosphotransferase) domain 1 754 938 - -
Dod01g3458 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Dod01g3458 956 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 69 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3458 Dod-Chr1 75708852 75718529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3458 1 911 MAP Kinase Kinase Kinase AT1G08720 56.531 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod01g3458 PK_Tyr_Ser-Thr 2.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3458 - - aprc:113870732 1374.38